HHsearch alignment for GI: 254780795 and conserved domain: cd07866
>cd07866 STKc_BUR1 The catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 subfamily. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen
Probab=97.78 E-value=0.00056 Score=45.37 Aligned_cols=148 Identities=11% Similarity=0.130 Sum_probs=73.9
Q ss_pred CEEEEEECCCCCEEEEEEEEE-CCC-CEEEEEECCCCCHH----HHHHHHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHC
Q ss_conf 605310046681200179994-399-58999821669988----99999999999853267-755510010267787522
Q gi|254780795|r 23 QLNSVQPIIHGVENSNFVIQT-SKG-TFILTIYEKRMNEK----DLPVFIELLHYISRNKL-PCPIPIPRNDGKLYGFLC 95 (316)
Q Consensus 23 ~~~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~~~~~----~l~~~~~ll~~L~~~gi-pvP~pi~~~~G~~~~~~~ 95 (316)
T Consensus 9 ~Y~i~~~iG~G~fg~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~H~nIi~~~~~~~~~-~~~~~~~~ 87 (311)
T cd07866 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVER-PDKSKRKR 87 (311)
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC-CCCCCCCC
T ss_conf 98975698417090999999999998999999860113316689999999999972799822035799973-66544547
Q ss_pred CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 45155786478870768998999999998643675306875433231124564576675200155227889999999888
Q gi|254780795|r 96 KKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLK 175 (316)
Q Consensus 96 ~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 175 (316)
T Consensus 88 ~~~~~v~ey~~~d------------l~~---~l~~~~~~l~--------~~~~------------~~i~~qll~al~ylH 132 (311)
T cd07866 88 GSVYMVTPYMDHD------------LSG---LLENPSVKLT--------ESQI------------KCYMLQLLEGINYLH 132 (311)
T ss_pred CEEEEEECCCCCC------------HHH---HHHHCCCCCC--------HHHH------------HHHHHHHHHHHHHHH
T ss_conf 6699998156876------------788---9985478999--------9999------------999999999999999
Q ss_pred HHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 76521077744402234642256279604873162135
Q gi|254780795|r 176 ESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 176 ~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 133 ~-------~~IiHRDlKPeNILl~~~~~~Kl~DFG~a~ 163 (311)
T cd07866 133 E-------NHILHRDIKAANILIDNQGILKIADFGLAR 163 (311)
T ss_pred H-------CCCEECCCCHHHEEECCCCCEEECCCCCCE
T ss_conf 7-------896011176899568899988985589873