HHsearch alignment for GI: 254780795 and conserved domain: cd07867
>cd07867 STKc_CDC2L6 The catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, ca
Probab=97.53 E-value=0.00064 Score=44.99 Aligned_cols=143 Identities=17% Similarity=0.193 Sum_probs=72.1
Q ss_pred CCCCCEEEEEEEEEC---C-CCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECC
Q ss_conf 466812001799943---9-958999821669988999999999998532677555100102677875224515578647
Q gi|254780795|r 30 IIHGVENSNFVIQTS---K-GTFILTIYEKRMNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFI 105 (316)
Q Consensus 30 i~~G~~Ntny~v~t~---~-~~yiLri~e~~~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i 105 (316)
T Consensus 9 iG~G~fg~V~~~~~~d~~~~~~vAiK~i~~~~~~~~~~rEi~iL~~l~hpn-----iv~l~~-~~~~~~~~~~~lv~e~~ 82 (317)
T cd07867 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPN-----VIALQK-VFLSHSDRKVWLLFDYA 82 (317)
T ss_pred EEECCCEEEEEEEECCCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCC-----CCCEEE-EEECCCCCEEEEEEECC
T ss_conf 511618099999971397377999999898777289999999998778989-----982889-99627997899999727
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 88707689989999999986436753068754332311245645766752001552278899999998887652107774
Q gi|254780795|r 106 KGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLPTG 185 (316)
Q Consensus 106 ~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp~g 185 (316)
T Consensus 83 ~~~------l~~~-------i~~~~~~~~~~--~~~~l~~~~----i--------~~i~~qll~al~ylH~-------~~ 128 (317)
T cd07867 83 EHD------LWHI-------IKFHRASKANK--KPMQLPRSM----V--------KSLLYQILDGIHYLHA-------NW 128 (317)
T ss_pred CCC------HHHH-------HHHHHHHHHCC--CCCCCCHHH----H--------HHHHHHHHHHHHHHHH-------CC
T ss_conf 997------8999-------88622101025--766789999----9--------9999999999999987-------89
Q ss_pred EEECCCCCCCEEEC-----CCCCEEEECCCCCC
Q ss_conf 44022346422562-----79604873162135
Q gi|254780795|r 186 IIHADLFPDNVLFY-----NNKIMGLIDFYFSC 213 (316)
Q Consensus 186 ~IHgDl~~~NiL~~-----~~~i~giIDF~~~~ 213 (316)
T Consensus 129 IiHRDiKP~NILi~~~~~~~~~vK-i~DFG~a~ 160 (317)
T cd07867 129 VLHRDLKPANILVMGEGPERGRVK-IADMGFAR 160 (317)
T ss_pred EECCCCCCCCEEEECCCCCCCCEE-ECCCCCCE
T ss_conf 552678700079823687668467-64666003