HHsearch alignment for GI: 254780795 and conserved domain: cd07872
>cd07872 STKc_PCTAIRE2 The catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could
Probab=97.48 E-value=0.0074 Score=38.12 Aligned_cols=139 Identities=15% Similarity=0.156 Sum_probs=73.8
Q ss_pred EEEEEECCCCCEEEEEEEEEC-CC-CEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf 053100466812001799943-99-589998216699---8899999999999853267755510010267787522451
Q gi|254780795|r 24 LNSVQPIIHGVENSNFVIQTS-KG-TFILTIYEKRMN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKP 98 (316)
Q Consensus 24 ~~~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~ 98 (316)
T Consensus 8 Y~~~~~iG~G~fg~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H-----pnIV~l~~---~~~~~~~~ 79 (309)
T cd07872 8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-----ANIVTLHD---IVHTDKSL 79 (309)
T ss_pred EEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHCCC-----CCEEEEEE---EEEECCEE
T ss_conf 78855861485929999998899979999998532222148999999999986789-----89841778---99659979
Q ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 55786478870768998999999998643675306875433231124564576675200155227889999999888765
Q gi|254780795|r 99 ANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESW 178 (316)
Q Consensus 99 ~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 178 (316)
T Consensus 80 ~lv~Ey~~~~------L------~~~l---~~~~~~~--------~~~~~~------------~~~~qil~al~ylH~-- 122 (309)
T cd07872 80 TLVFEYLDKD------L------KQYM---DDCGNIM--------SMHNVK------------IFLYQILRGLAYCHR-- 122 (309)
T ss_pred EEEEECCCCC------H------HHHH---HHCCCCC--------CHHHHH------------HHHHHHHHHHHHHHH--
T ss_conf 9999634777------8------9999---9728889--------999999------------999999999999997--
Q ss_pred HHCCCCCEEECCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf 21077744402234642256279-604873162135
Q gi|254780795|r 179 PKNLPTGIIHADLFPDNVLFYNN-KIMGLIDFYFSC 213 (316)
Q Consensus 179 ~~~Lp~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~ 213 (316)
T Consensus 123 -----~~IiHRDiKPeNILl~~~g~vK-l~DFGla~ 152 (309)
T cd07872 123 -----RKVLHRDLKPQNLLINERGELK-LADFGLAR 152 (309)
T ss_pred -----CCEEECCCCCHHEEECCCCCEE-EEEECCCH
T ss_conf -----8916455750316887889787-50433311