HHsearch alignment for GI: 254780795 and conserved domain: cd07872

>cd07872 STKc_PCTAIRE2 The catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could
Probab=97.48  E-value=0.0074  Score=38.12  Aligned_cols=139  Identities=15%  Similarity=0.156  Sum_probs=73.8

Q ss_pred             EEEEEECCCCCEEEEEEEEEC-CC-CEEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf             053100466812001799943-99-589998216699---8899999999999853267755510010267787522451
Q gi|254780795|r   24 LNSVQPIIHGVENSNFVIQTS-KG-TFILTIYEKRMN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKP   98 (316)
Q Consensus        24 ~~~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~   98 (316)
T Consensus         8 Y~~~~~iG~G~fg~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~H-----pnIV~l~~---~~~~~~~~   79 (309)
T cd07872           8 YIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKH-----ANIVTLHD---IVHTDKSL   79 (309)
T ss_pred             EEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHCCC-----CCEEEEEE---EEEECCEE
T ss_conf             78855861485929999998899979999998532222148999999999986789-----89841778---99659979


Q ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             55786478870768998999999998643675306875433231124564576675200155227889999999888765
Q gi|254780795|r   99 ANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESW  178 (316)
Q Consensus        99 ~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  178 (316)
T Consensus        80 ~lv~Ey~~~~------L------~~~l---~~~~~~~--------~~~~~~------------~~~~qil~al~ylH~--  122 (309)
T cd07872          80 TLVFEYLDKD------L------KQYM---DDCGNIM--------SMHNVK------------IFLYQILRGLAYCHR--  122 (309)
T ss_pred             EEEEECCCCC------H------HHHH---HHCCCCC--------CHHHHH------------HHHHHHHHHHHHHHH--
T ss_conf             9999634777------8------9999---9728889--------999999------------999999999999997--


Q ss_pred             HHCCCCCEEECCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf             21077744402234642256279-604873162135
Q gi|254780795|r  179 PKNLPTGIIHADLFPDNVLFYNN-KIMGLIDFYFSC  213 (316)
Q Consensus       179 ~~~Lp~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~  213 (316)
T Consensus       123 -----~~IiHRDiKPeNILl~~~g~vK-l~DFGla~  152 (309)
T cd07872         123 -----RKVLHRDLKPQNLLINERGELK-LADFGLAR  152 (309)
T ss_pred             -----CCEEECCCCCHHEEECCCCCEE-EEEECCCH
T ss_conf             -----8916455750316887889787-50433311