HHsearch alignment for GI: 254780795 and conserved domain: cd07878

>cd07878 STKc_p38beta_MAPK11 The catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11,
Probab=97.31  E-value=0.01  Score=37.22  Aligned_cols=143  Identities=13%  Similarity=0.163  Sum_probs=68.4

Q ss_pred             EEEEECCCCCEEEEEEEEE-CCC-CEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHCCC
Q ss_conf             5310046681200179994-399-589998216699----8899999999999853267755510010-26778752245
Q gi|254780795|r   25 NSVQPIIHGVENSNFVIQT-SKG-TFILTIYEKRMN----EKDLPVFIELLHYISRNKLPCPIPIPRN-DGKLYGFLCKK   97 (316)
Q Consensus        25 ~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~~~----~~~l~~~~~ll~~L~~~gipvP~pi~~~-~G~~~~~~~~k   97 (316)
T Consensus        18 ~~~~~IG~G~fG~Vy~a~d~~t~~~vAiK~i~~~~~~~~~~~~~~rEi~il~~l~H~nIv--~l~~~f~~~~~~-~~~~~   94 (343)
T cd07878          18 QNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVI--GLLDVFTPATSI-ENFNE   94 (343)
T ss_pred             EEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC--EEEEEECCCCCC-CCCCE
T ss_conf             873697316084999999899998999999882012358899999999999866898941--178885146655-55876


Q ss_pred             CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf             15578647887076899899999999864367530687543323112456457667520015522788999999988876
Q gi|254780795|r   98 PANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKES  177 (316)
Q Consensus        98 ~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~  177 (316)
T Consensus        95 ~~lv~e~~-g~~L---------------~~~~k~-~~l~--------e~~i~------------~i~~Qil~aL~ylHs-  136 (343)
T cd07878          95 VYLVTNLM-GADL---------------NNIVKC-QKLS--------DEHVQ------------FLIYQLLRGLKYIHS-  136 (343)
T ss_pred             EEEEEECC-CCCH---------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHHHHHHH-
T ss_conf             99998058-9679---------------999862-9999--------99999------------999999999999988-


Q ss_pred             HHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf             5210777444022346422562796048731621356
Q gi|254780795|r  178 WPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN  214 (316)
Q Consensus       178 ~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~  214 (316)
T Consensus       137 ------~~IIHRDLKP~NILl~~~~~vKL~DFGlA~~  167 (343)
T cd07878         137 ------AGIIHRDLKPSNVAVNEDCELRILDFGLARQ  167 (343)
T ss_pred             ------CCCEECCCCHHHEEECCCCCEEEEECCCCEE
T ss_conf             ------8855466872554686778779841446611