HHsearch alignment for GI: 254780795 and conserved domain: cd07878
>cd07878 STKc_p38beta_MAPK11 The catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11,
Probab=97.31 E-value=0.01 Score=37.22 Aligned_cols=143 Identities=13% Similarity=0.163 Sum_probs=68.4
Q ss_pred EEEEECCCCCEEEEEEEEE-CCC-CEEEEEECCCCC----HHHHHHHHHHHHHHHHCCCCCCCCCCCC-HHHHHHHHCCC
Q ss_conf 5310046681200179994-399-589998216699----8899999999999853267755510010-26778752245
Q gi|254780795|r 25 NSVQPIIHGVENSNFVIQT-SKG-TFILTIYEKRMN----EKDLPVFIELLHYISRNKLPCPIPIPRN-DGKLYGFLCKK 97 (316)
Q Consensus 25 ~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~~~----~~~l~~~~~ll~~L~~~gipvP~pi~~~-~G~~~~~~~~k 97 (316)
T Consensus 18 ~~~~~IG~G~fG~Vy~a~d~~t~~~vAiK~i~~~~~~~~~~~~~~rEi~il~~l~H~nIv--~l~~~f~~~~~~-~~~~~ 94 (343)
T cd07878 18 QNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVI--GLLDVFTPATSI-ENFNE 94 (343)
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCC--EEEEEECCCCCC-CCCCE
T ss_conf 873697316084999999899998999999882012358899999999999866898941--178885146655-55876
Q ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 15578647887076899899999999864367530687543323112456457667520015522788999999988876
Q gi|254780795|r 98 PANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKES 177 (316)
Q Consensus 98 ~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 177 (316)
T Consensus 95 ~~lv~e~~-g~~L---------------~~~~k~-~~l~--------e~~i~------------~i~~Qil~aL~ylHs- 136 (343)
T cd07878 95 VYLVTNLM-GADL---------------NNIVKC-QKLS--------DEHVQ------------FLIYQLLRGLKYIHS- 136 (343)
T ss_pred EEEEEECC-CCCH---------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHHHHHHH-
T ss_conf 99998058-9679---------------999862-9999--------99999------------999999999999988-
Q ss_pred HHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 5210777444022346422562796048731621356
Q gi|254780795|r 178 WPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 178 ~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 137 ------~~IIHRDLKP~NILl~~~~~vKL~DFGlA~~ 167 (343)
T cd07878 137 ------AGIIHRDLKPSNVAVNEDCELRILDFGLARQ 167 (343)
T ss_pred ------CCCEECCCCHHHEEECCCCCEEEEECCCCEE
T ss_conf ------8855466872554686778779841446611