HHsearch alignment for GI: 254780795 and conserved domain: smart00587
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=99.04 E-value=8.6e-10 Score=82.99 Aligned_cols=143 Identities=17% Similarity=0.151 Sum_probs=77.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC---------------CCHHHHHHHHHH----HHHCC----CHH
Q ss_conf 8870768998999999998643675306875433231---------------124564576675----20015----522
Q gi|254780795|r 106 KGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNT---------------LSPLNLKFLWAK----CFDKV----DED 162 (316)
Q Consensus 106 ~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~---------------~~~~~~~~~~~~----~~~~~----~~~ 162 (316)
T Consensus 13 ~~~~~~~~~~~~~~~~l~~LA~~HA~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (196)
T smart00587 13 NADRLKGLDLEHTSLVLKKLAKLHAASAVLIEEEKGSYLEEFDEGLFERFKRMFSEEFIGGLENFLRELLSQPELLKVEE 92 (196)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 37757898999999999999999656899987547666888532211246366899999999999999985412255699
Q ss_pred HHHHHHHHHHHHHHH-----HHH-CCCCCEEECCCCCCCEEECCC---C--CEEEECCCCCCCCHHHCCHHHHHHHHHHC
Q ss_conf 788999999988876-----521-077744402234642256279---6--04873162135680001989999864311
Q gi|254780795|r 163 LKKEIDHEFCFLKES-----WPK-NLPTGIIHADLFPDNVLFYNN---K--IMGLIDFYFSCNDFLMYDLSICINAWCFD 231 (316)
Q Consensus 163 ~~~~l~~~l~~~~~~-----~~~-~Lp~g~IHgDl~~~NiL~~~~---~--i~giIDF~~~~~~~~i~DLAi~i~~~c~~ 231 (316)
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~HGD~w~nN~lf~~d~~g~~~~~~liDfQ~~~~g~p~~Dl~~fl~-~s~~ 171 (196)
T smart00587 93 YIEKLDKLLDNLEDLKKEDKEPDEGEFNVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSHYGSPAEDLHYFLL-TSLS 171 (196)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHCEEEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHH-HCCC
T ss_conf 999999988999999998426676785377715434311535107999833036642203045882999999999-8899
Q ss_pred CCCCCCHHHHHHHHHHHHHC
Q ss_conf 68887878899999887641
Q gi|254780795|r 232 ENNTYNPSRGFSILNGYNKV 251 (316)
Q Consensus 232 ~~~~~d~~~~~~~l~gY~~v 251 (316)
T Consensus 172 ~~--~R~~~~~~lL~~Y~~~ 189 (196)
T smart00587 172 VE--IRREHFDELLKFYYET 189 (196)
T ss_pred HH--HHHHHHHHHHHHHHHH
T ss_conf 99--9999999999999999