HHsearch alignment for GI: 254780796 and conserved domain: pfam05380
>pfam05380 Peptidase_A17 Pao retrotransposon peptidase. Corresponds to Merops family A17. These proteins are homologous to aspartic proteinases encoded by retroposons and retroviruses.
Probab=92.18 E-value=0.3 Score=27.31 Aligned_cols=51 Identities=16% Similarity=0.299 Sum_probs=31.8
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEEC----CCCEE--EEE-----CCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 8999966475799982189999961----88127--860-----222766302789999998641134
Q gi|254780796|r 8 EVHAYTDGACSGNPGPGGWGVLLRY----KGKEK--IIS-----GGEKETTNNRMELMAAIKALTALK 64 (152)
Q Consensus 8 ~i~IytDGS~~~n~~~aG~g~v~~~----~~~~~--~~~-----~~~~~~Tnn~aEl~Ai~~AL~~~~ 64 (152)
T Consensus 81 elH~F~DAS~~------aYgav~Y~r~~~~~~~~~~ll~aKsrVAPlK~~TIPRLEL~aA~l~arl~~ 142 (159)
T pfam05380 81 QLHGFCDASEK------AYAAAVYWRVEEGEEIQVSLVAAKTRVAPLKTVSIPRLELCAALLLTRLAR 142 (159)
T ss_pred EEEEEECHHHH------HCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 88875201120------004899999953996799999973221675466445899999999999999