HHsearch alignment of GI: 254780796 and MMDB domain: 2e4l_A_
>2e4l_A (A:) Ribonuclease HI, RNAse HI; hydrolase, endoribonuclease; 2.00A {Shewanella oneidensis mr-1} PDB: 2zqb_A
Probab=100.00 E-value=1.4e-35 Score=219.88 Aligned_cols=143 Identities=51% Similarity=1.002 Sum_probs=134.3
Q ss_pred CCCEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCC
Q ss_conf 78889999664757999821899999618812786022276630278999999864113454037884064550325652
Q gi|254780796|r 5 HLREVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLLYTDSSYVHKGFSQ 84 (152)
Q Consensus 5 ~~~~i~IytDGS~~~n~~~aG~g~v~~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~~~~~i~I~tDS~yvv~~i~~ 84 (152)
.+..++|||||||++||+++|||+|+..++......+....+|||+||+.|++.||+.+.....+.|++||+|++++++.
T Consensus 3 ~~~~~~iytDGS~~~~~~~~G~g~v~~~~~~~~~~~~~~~~~tn~~aE~~A~~~al~~a~~~~~~~~~~ds~~~i~~~~~ 82 (158)
T 2e4l_A 3 ELKLIHIFTDGSCLGNPGPGGYGIVMNYKGHTKEMSDGFSLTTNNRMELLAPIVALEALKEPCKIILTSDSQYMRQGIMT 82 (158)
T ss_dssp -CCEEEEEEEEEESSSSEEEEEEEEEEETTEEEEEEEEEEEECHHHHHHHHHHHHHHTCSSCCEEEEEECCHHHHHHHHT
T ss_pred CCCEEEEEEEECCCCCCCCEEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEECCC
T ss_conf 78779999700789999947999999979926898620055516677777799999865678729999423014760333
Q ss_pred HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 256776543200355642110002345410222105589801788884558999999999998
Q gi|254780796|r 85 WIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGNQENEKVDRIARNAAVS 147 (152)
Q Consensus 85 ~~~~W~~n~wk~~~~~~v~N~dl~~~l~~l~~~~~v~~~~V~gH~g~~~N~~AD~lA~~aa~~ 147 (152)
|+..|..++|++..+.++.+.++++.+..+.+..+|.|.|||||+|++||++||+|||+|+..
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~wv~gH~g~~gNe~AD~LAk~a~~~ 145 (158)
T 2e4l_A 83 WIHGWKKKGWMTSNRTPVKNVDLWKRLDKAAQLHQIDWRWVKGHAGHAENERCDQLARAAAEA 145 (158)
T ss_dssp HHHHHHHTTTBCTTSSBCTTHHHHHHHHHHHTTSEEEEEECCTTCCCHHHHHHHHHHHHHHHS
T ss_pred CCCHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 231000032112034530018899887763446468999746648964289999999999866