Probab=99.97 E-value=6.7e-32 Score=197.04 Aligned_cols=121 Identities=24% Similarity=0.263 Sum_probs=94.2 Q ss_pred CEEEEEECCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHCCCCCCCHH Q ss_conf 88999966475799982189999961881278602227663027899999986411345403788406455032565225 Q gi|254780796|r 7 REVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLLYTDSSYVHKGFSQWI 86 (152) Q Consensus 7 ~~i~IytDGS~~~n~~~aG~g~v~~~~~~~~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~~~~~i~I~tDS~yvv~~i~~~~ 86 (152) ..+++||||||++|++++|+|+++..+.... .....+|||+|||.|+++||++.. ..+.|+|||+||++.++.|. T Consensus 6 ~~~t~YTDGS~~~n~~~~~~g~~~~~~~~~~---~~~~~~tnn~AEl~Ai~~al~~~~--~~i~I~tDS~~v~~~~~~~~ 80 (126) T d1mu2a1 6 GAETFYTDGSCNRQSKEGKAGYVTDRGKDKV---KKLEQTTNQQAELEAFAMALTDSG--PKVNIIVDSQYVMGIVASQP 80 (126) T ss_dssp TCEEEEEEEEECTTTCCEEEEEEETTSCEEE---EEESSCCHHHHHHHHHHHHHHTSC--SEEEEEESCHHHHHHHHTCC T ss_pred CCCEEEECCCCCCCCCCEEEEEEECCCCEEE---EECCCCCCHHHHHHHHHHHHCCCC--CCEEEEECHHHHHHHHHCCC T ss_conf 9959998489789998689999955797777---744777606899999998740378--64199963399999874187 Q ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH Q ss_conf 67765432003556421100023454102221055898017888845589999999999 Q gi|254780796|r 87 KKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGNQENEKVDRIARNAA 145 (152) Q Consensus 87 ~~W~~n~wk~~~~~~v~N~dl~~~l~~l~~~~~v~~~~V~gH~g~~~N~~AD~lA~~aa 145 (152) .. ..+..+++.+..+....+|.|.|||||+|++|||+||+||++|+ T Consensus 81 ~~-------------~~~~~~~~~~~~~~~~~~v~~~wV~gH~g~~gNe~AD~LA~~ai 126 (126) T d1mu2a1 81 TE-------------SESKIVNQIIEEMIKKEAIYVAWVPAHKGIGGNQEVDHLVSQGI 126 (126) T ss_dssp SE-------------ESCHHHHHHHHHHHHCSEEEEEECCSSSCCTTHHHHHHHHHTTC T ss_pred CC-------------CCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHC T ss_conf 53-------------34507888877764133347999858899953299999998439
class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: HIV RNase H (Domain of reverse transcriptase)
species: Human immunodeficiency virus type 2 [TaxId: 11709]