PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1hrh
>gi|230011|pdb|1HRH|A Chain A, Crystal Structure Of The Ribonuclease H Domain Of Hiv-1 Reverse Transcriptase Length = 136
>gi|230012|pdb|1HRH|B Chain B, Crystal Structure Of The Ribonuclease H Domain Of Hiv-1 Reverse Transcriptase Length = 136
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 18/137 (13%)
Query: 12 YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
Y DGA + G G + ++ + + A++ +V +
Sbjct: 15 YVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQ-----DSGLEVNI 69
Query: 72 YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGN 131
TDS Y G + ++ + + + KV L W+ H G
Sbjct: 70 VTDSQYA-------------LGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGI 116
Query: 132 QENEKVDRIARNAAVSF 148
NE+VD++
Sbjct: 117 GGNEQVDKLVSAGIRKI 133