PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1n5y

>gi|28373910|pdb|1N5Y|A Chain A, Hiv-1 Reverse Transcriptase Crosslinked To Post- Translocation Aztmp-Terminated Dna (Complex P) Length = 558
>gi|28373921|pdb|1N6Q|A Chain A, Hiv-1 Reverse Transcriptase Crosslinked To Pre- Translocation Aztmp-Terminated Dna (Complex N) Length = 558
 Score = 45.6 bits (106), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 43/136 (31%), Gaps = 18/136 (13%)

Query: 12  YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
           Y DGA +     G  G +     ++ +              +  A++         +V +
Sbjct: 441 YVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQ-----DSGLEVNI 495

Query: 72  YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGN 131
            TDS Y               G   +     ++  +     +   + KV L W+  H G 
Sbjct: 496 VTDSQYA-------------LGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGI 542

Query: 132 QENEKVDRIARNAAVS 147
             NE+VD++       
Sbjct: 543 GGNEQVDKLVSAGIRK 558