RPSBLAST alignment for GI: 254780796 and conserved domain: pfam00075
>gnl|CDD|143857 pfam00075, RnaseH, RNase H. RNase H digests the RNA strand of an RNA/DNA hybrid. Important enzyme in retroviral replication cycle, and often found as a domain associated with reverse transcriptases. Structure is a mixed alpha+beta fold with three a/b/a layers. Length = 126
Score = 119 bits (300), Expect = 3e-28
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Query: 12 YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
YTDG+C+GNPG GG G + GK++ TTN R EL+A I+AL AL KV +
Sbjct: 7 YTDGSCNGNPGTGGAGYVT-DGGKQRSKPLPG--TTNQRAELLALIEALEALS-GQKVNI 62
Query: 72 YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGN 131
YTDS YV G + W S+ K +KN ++W +H V + W+ GH+G
Sbjct: 63 YTDSQYVIGGI---LNGWP----TKSESKPIKN-EIWE---LLLKKHAVYIQWVPGHSGI 111
Query: 132 QENEKVDRIARNAA 145
NE D++A+ A
Sbjct: 112 PGNELADKLAKQGA 125