RPSBLAST alignment of GI: 254780796 and protein with PDBid: 2qkb
>2qkb_A Ribonuclease H1, HS-RNAse HC, RNAse H1; RNA/DNA hybrid; 2.40A {Homo sapiens} PDB: 2qk9_A 2qkk_A* Length = 154
Score = 99.3 bits (246), Expect = 3e-22
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 5/142 (3%)
Query: 9 VHAYTDGACSGNPGPGGWGVLLRYKGKEKIIS---GGEKETTNNRMELMAAIKALTA--L 63
V YTDG CS N + Y G ++ TN R E+ AA KA+
Sbjct: 8 VVVYTDGCCSSNGRRRPRAGIGVYWGPGHPLNVGIRLPGRQTNQRAEIHAACKAIEQAKT 67
Query: 64 KYPCKVLLYTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLY 123
+ K++LYT+S + G + W++ W++NGWKTS K V N + ++ + +
Sbjct: 68 QNINKLVLYTNSMFTINGITNWVQGWKKNGWKTSAGKEVINKEDFVALERLTQGMDIQWM 127
Query: 124 WIKGHAGNQENEKVDRIARNAA 145
+ GH+G NE+ DR+AR A
Sbjct: 128 HVPGHSGFIGNEEADRLAREGA 149