RPSBLAST alignment of GI: 254780796 and protein with PDBid: 3hyf
>3hyf_A Reverse transcriptase/rnaseh; HIV-1, hydrolase, DI-valent metal nucleic acid cleavage mechanism, DI-valent metal coordination; HET: ON1; 1.70A {Human immunodeficiency virus 1} PDB: 1o1w_A 1hrh_A 1rdh_A Length = 150
Score = 113 bits (284), Expect = 1e-26
Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 6/135 (4%)
Query: 12 YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
Y DGA + G G + + +TTN + EL A L +V +
Sbjct: 16 YVDGAANRETKLGKAGYVTNRG---RQKVVTLTDTTNQKTELQAIY--LALQDSGLEVNI 70
Query: 72 YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQ-HKVDLYWIKGHAG 130
TDS Y +QWI W++ GWKT+DKK VKN+DL + +E + KV L W+ H G
Sbjct: 71 VTDSQYALGIITQWIHNWKKRGWKTADKKPVKNVDLVNQIIEQLIKKEKVYLAWVPAHKG 130
Query: 131 NQENEKVDRIARNAA 145
NE+VD++
Sbjct: 131 IGGNEQVDKLVSAGI 145