RPSBLAST alignment of GI: 254780796 and protein with PDBid: 3p1g
>3p1g_A Xenotropic murine leukemia virus-related virus (X H domain; XMRV, RNAse H, reverse transcriptase, transcription; 1.50A {Xenotropic mulv-related virus} PDB: 2hb5_A Length = 165
Score = 114 bits (286), Expect = 8e-27
Identities = 31/144 (21%), Positives = 52/144 (36%), Gaps = 18/144 (12%)
Query: 8 EVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPC 67
+ YTDG+ G G + + + T+ R EL+A +AL
Sbjct: 23 DYTWYTDGSSFLQEGQRRAGAAVTTETEVIWARALPAGTSAQRAELIALTQALKMA-EGK 81
Query: 68 KVLLYTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEA-SAQHKVDLYWIK 126
K+ +YTDS Y S+ + +KN + + ++A ++ +
Sbjct: 82 KLNVYTDSRYAFAT-----------AHVHSEGREIKNKNEILALLKALFLPKRLSIIHCP 130
Query: 127 GHAGNQE-----NEKVDRIARNAA 145
GH N D+ AR AA
Sbjct: 131 GHQKGNSAEARGNRMADQAAREAA 154