HHsearch alignment for GI: 254780797 and conserved domain: PRK11756

>PRK11756 exonuclease III; Provisional.
Probab=99.87  E-value=6.5e-21  Score=129.89  Aligned_cols=153  Identities=17%  Similarity=0.200  Sum_probs=97.7

Q ss_pred             EEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf             899887310076777556667666687999999999997518989999727998--899987262322167740357876
Q gi|254780797|r    7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSY--EAIKRVFPNDKWDILYSGSNTDKH   84 (231)
Q Consensus         7 lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~--~~~~~~~~~~~~~~~~~~~~~~~~   84 (231)
T Consensus         1 MkI~SwNVNgi--------------R--ar~~~l~~~l~~~~pDIlcLQEtK~~~~~~p~~~~~~~gY~~~~~~-----~   59 (268)
T PRK11756          1 MKFVSFNINGL--------------R--ARPHQLEAIIEKHQPDVIGLQETKVHDEMFPLEEVEALGYHVFYHG-----Q   59 (268)
T ss_pred             CEEEEEEEHHH--------------H--HHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHCCCEEEEEC-----C
T ss_conf             98999986668--------------6--7588899999777998999987738811289889852695899961-----6


Q ss_pred             CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             50356886146410100001221467565544575049999984997899999751168888754300254578875489
Q gi|254780797|r   85 AMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQA  164 (231)
Q Consensus        85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~q~  164 (231)
T Consensus        60 KgysGVAi~sk~~p~~v~~g~~----~~~~d~egR-~i~~~~~~~~g~~~lin~Y~PnG~~~~~-----~~k~~~K~~f~  129 (268)
T PRK11756         60 KGHYGVALLSKQTPIAVRKGFP----TDDEEAQRR-IIMATIPTPNGNLTVINGYFPQGESRDH-----PTKFPAKRQFY  129 (268)
T ss_pred             CCCCCEEEEECCCCHHEEECCC----CCCCCCCCC-EEEEEEECCCCCEEEEEEEECCCCCCCC-----HHHHHHHHHHH
T ss_conf             7734446872367244586488----885444562-7999996377629999985048887772-----56778899999


Q ss_pred             HHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf             99999999740488789999136888
Q gi|254780797|r  165 TWLKQWVDQKNNLNMPFIIAGDFNRK  190 (231)
Q Consensus       165 ~~l~~~i~~~~~~~~~vii~GDFN~~  190 (231)
T Consensus       130 ~~l~~~l~~~~~~~k~vIi~GD~NVA  155 (268)
T PRK11756        130 QDLQNYLETELSPDNPLLIMGDMNIS  155 (268)
T ss_pred             HHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf             99999999976479958995643435