HHsearch alignment for GI: 254780797 and conserved domain: PRK11756
>PRK11756 exonuclease III; Provisional.
Probab=99.87 E-value=6.5e-21 Score=129.89 Aligned_cols=153 Identities=17% Similarity=0.200 Sum_probs=97.7
Q ss_pred EEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 899887310076777556667666687999999999997518989999727998--899987262322167740357876
Q gi|254780797|r 7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSY--EAIKRVFPNDKWDILYSGSNTDKH 84 (231)
Q Consensus 7 lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 84 (231)
T Consensus 1 MkI~SwNVNgi--------------R--ar~~~l~~~l~~~~pDIlcLQEtK~~~~~~p~~~~~~~gY~~~~~~-----~ 59 (268)
T PRK11756 1 MKFVSFNINGL--------------R--ARPHQLEAIIEKHQPDVIGLQETKVHDEMFPLEEVEALGYHVFYHG-----Q 59 (268)
T ss_pred CEEEEEEEHHH--------------H--HHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHCCCEEEEEC-----C
T ss_conf 98999986668--------------6--7588899999777998999987738811289889852695899961-----6
Q ss_pred CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 50356886146410100001221467565544575049999984997899999751168888754300254578875489
Q gi|254780797|r 85 AMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQA 164 (231)
Q Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~q~ 164 (231)
T Consensus 60 KgysGVAi~sk~~p~~v~~g~~----~~~~d~egR-~i~~~~~~~~g~~~lin~Y~PnG~~~~~-----~~k~~~K~~f~ 129 (268)
T PRK11756 60 KGHYGVALLSKQTPIAVRKGFP----TDDEEAQRR-IIMATIPTPNGNLTVINGYFPQGESRDH-----PTKFPAKRQFY 129 (268)
T ss_pred CCCCCEEEEECCCCHHEEECCC----CCCCCCCCC-EEEEEEECCCCCEEEEEEEECCCCCCCC-----HHHHHHHHHHH
T ss_conf 7734446872367244586488----885444562-7999996377629999985048887772-----56778899999
Q ss_pred HHHHHHHHHHCCCCCCEEEEEECCCC
Q ss_conf 99999999740488789999136888
Q gi|254780797|r 165 TWLKQWVDQKNNLNMPFIIAGDFNRK 190 (231)
Q Consensus 165 ~~l~~~i~~~~~~~~~vii~GDFN~~ 190 (231)
T Consensus 130 ~~l~~~l~~~~~~~k~vIi~GD~NVA 155 (268)
T PRK11756 130 QDLQNYLETELSPDNPLLIMGDMNIS 155 (268)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 99999999976479958995643435