HHsearch alignment of GI: 254780797 and MMDB domain: 1sr4_B_106-228
>1sr4_B (B:106-228) CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi}
Probab=94.02 E-value=0.11 Score=27.08 Aligned_cols=62 Identities=18% Similarity=0.182 Sum_probs=34.7
Q ss_pred CCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----HCCCCCCEEEEEECCCCC
Q ss_conf 4575049999984997899999751168888754300254578875489999999997----404887899991368884
Q gi|254780797|r 116 AGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQ----KNNLNMPFIIAGDFNRKI 191 (231)
Q Consensus 116 ~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~q~~~l~~~i~~----~~~~~~~vii~GDFN~~~ 191 (231)
...|+++.+++.. -.++++|.-+....+... -+..+..+... -..+..+++++||||..+
T Consensus 14 ~~sRPiiGIRign----d~FFsiHALa~GG~DA~a------------iv~~v~~~f~~~~~~~~~~~~~W~I~GDFNR~P 77 (123)
T 1sr4_B 14 LQSRPAVGIRIGT----DVFFTVHALATGGSDAVS------------LIRNIFTTFNSSSSPPERRVYSWMVVGDFNRAP 77 (123)
T ss_dssp SCCCCEEEEEETT----EEEEEEECCTTTTTTHHH------------HHHHHHHHHHC---CGGGGGCEEEEEEECSSCH
T ss_pred CCCCEEEEEEEEC----CCCCEEEEECCCCCCHHH------------HHHHHHHHHHHHHHHHCCCCCCEEEEHHCCCCC
T ss_conf 5410379999724----663038982388851788------------999999999998777505789789710026544
Q ss_pred CC
Q ss_conf 62
Q gi|254780797|r 192 NH 193 (231)
Q Consensus 192 ~~ 193 (231)
..
T Consensus 78 ~~ 79 (123)
T 1sr4_B 78 AN 79 (123)
T ss_dssp HH
T ss_pred CC
T ss_conf 62