HHsearch alignment of GI: 254780797 and MMDB domain: 1wdu_A_
>1wdu_A (A:) TRAS1 ORF2P; four-layered alpha/beta sandwich, RNA binding protein; 2.40A {Bombyx mori}
Probab=99.45 E-value=1.9e-11 Score=79.10 Aligned_cols=146 Identities=16% Similarity=0.056 Sum_probs=83.6
Q ss_pred CCEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 65489988731007677755666766668799999999999751898999972799889998726232216774035787
Q gi|254780797|r 4 AQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAIKRVFPNDKWDILYSGSNTDK 83 (231)
Q Consensus 4 ~~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (231)
+.+|||+||||+++ ..+.+.|++.|++.+||||||||+........... ...+.+.......
T Consensus 17 ~~~lrv~t~Ni~~~----------------~~~~~~l~~~i~~~~pDIv~lQE~~~~~~~~~~~~--~~~~~~~~~~~~~ 78 (245)
T 1wdu_A 17 GPPYRVLQANLQRK----------------KLATAELAIEAATRKAAIALIQEPYVGGAKSMKGF--RGVRVFQSTAQGD 78 (245)
T ss_dssp -CCEEEEEEECTTC----------------HHHHHHHHHHHHHHTCSEEEEESCCC------CCC--SSCEEEECCCCTT
T ss_pred CCCEEEEEECCCCC----------------HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHC--CCCEEEEEECCCC
T ss_conf 99879998847987----------------66899999999861998999987887776520002--5611367645689
Q ss_pred CCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 65035688614641010000122146756554457504999998499789999975116888875430025457887548
Q gi|254780797|r 84 HAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQ 163 (231)
Q Consensus 84 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~q 163 (231)
.+...++++.............. ......+.....+..+.++++|.+..... +...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~ 134 (245)
T 1wdu_A 79 GTVKAAIAVFDHDLDVIQYPQLT-----------TNNIVVVGIRTRAWEITLVSYYFEPDKPI-------------ESYL 134 (245)
T ss_dssp CCCCEEEEECCSSCEEEECTTTC-----------CSSEEEEEEECSSCEEEEEEEECCTTSCS-------------HHHH
T ss_pred CCCEEEEEEECCCCCEEEECCCC-----------CCCEEEEEEEECCCCEEEEEEECCCCCCH-------------HHHH
T ss_conf 98679999971564135514888-----------79859999990892089999960874431-------------8999
Q ss_pred HHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
Q ss_conf 9999999997404887899991368884622
Q gi|254780797|r 164 ATWLKQWVDQKNNLNMPFIIAGDFNRKINHS 194 (231)
Q Consensus 164 ~~~l~~~i~~~~~~~~~vii~GDFN~~~~~~ 194 (231)
.. ..... ......+.+++||||......
T Consensus 135 ~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~ 162 (245)
T 1wdu_A 135 EQ-IKRVE--RKMGPKRLIFGGDANAKSTWW 162 (245)
T ss_dssp HH-HHHHH--HTTCSSSEEEEEECCCCCGGG
T ss_pred HH-HHHHH--HHCCCCEEEECCCCCCCCHHH
T ss_conf 99-99998--752797399805467477111