HHsearch alignment of GI: 254780797 and MMDB domain: 2a40_B_88-227
>2a40_B (B:88-227) Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus}
Probab=98.18 E-value=2e-05 Score=47.05 Aligned_cols=65 Identities=17% Similarity=0.142 Sum_probs=42.7
Q ss_pred CCCCCCCEEEEEEEEECC---EEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH---HHHHHHHCCCCCCEEEEEE
Q ss_conf 554457504999998499---7899999751168888754300254578875489999---9999974048878999913
Q gi|254780797|r 113 DSKAGKRRAVEILFEVDG---RKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWL---KQWVDQKNNLNMPFIIAGD 186 (231)
Q Consensus 113 ~~~~~~r~~~~~~~~~~g---~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~q~~~l---~~~i~~~~~~~~~vii~GD 186 (231)
....+.|.+..+.|..++ +.++++++|.... .+..++.+| .+.+.++. ...++|++||
T Consensus 18 ~~d~F~ReP~~v~F~~~~~~~~df~lv~~Ht~p~---------------~~~~E~~~L~dV~~~v~~~~-~~~dviilGD 81 (140)
T 2a40_B 18 GNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPS---------------DAVAEINSLYDVYLDVQQKW-HLNDVMLMGD 81 (140)
T ss_dssp HHHHCSSCCEEEEEECTTSSSSEEEEEECCCCGG---------------GHHHHHHHHHHHHHHHHHHH-CCCCEEEEEE
T ss_pred CCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCC---------------CHHHHHHHHHHHHHHHHHHC-CCCCEEEECC
T ss_conf 4422220103688996057872899850233332---------------14899999899999887504-6787798341
Q ss_pred CCCCCCC
Q ss_conf 6888462
Q gi|254780797|r 187 FNRKINH 193 (231)
Q Consensus 187 FN~~~~~ 193 (231)
||...++
T Consensus 82 FNa~c~y 88 (140)
T 2a40_B 82 FNADCSY 88 (140)
T ss_dssp CCCSTTT
T ss_pred CCCCCCC
T ss_conf 2567774