HHsearch alignment of GI: 254780797 and MMDB domain: 2j63_A_1-134_233-439
>2j63_A (A:1-134,A:233-439) AP-endonuclease; base excision repair, lyase; 2.48A {Leishmania major}
Probab=97.98 E-value=9.6e-05 Score=43.45 Aligned_cols=60 Identities=17% Similarity=0.033 Sum_probs=35.0
Q ss_pred EEEEEEEEEECCCCCCCCCCCHHHHHHH-HHHHHHHHHHH-----------HHHHHCCCCCCEEEEEECCCC
Q ss_conf 7899999751168888754300254578-87548999999-----------999740488789999136888
Q gi|254780797|r 131 RKIWLLDIHLKSFCFLDSIEDSYISSCY-MLNLQATWLKQ-----------WVDQKNNLNMPFIIAGDFNRK 190 (231)
Q Consensus 131 ~~~~v~n~HL~s~~~~~~~~~~~~~~~~-~~~~q~~~l~~-----------~i~~~~~~~~~vii~GDFN~~ 190 (231)
..|+|+|++++.+.........++..+. .....++.+.+ .+....+.+.++|+|||||.-
T Consensus 190 ~~i~IiNvYvPnGg~~~~r~~~~k~~w~~~l~~~l~~L~~~~~~f~~~l~~~~~~l~~~gkpVIl~GDfNVA 261 (341)
T 2j63_A 190 SRIALVNTYVANSGMGLTRLPYRVQSFDPSMREYLHRLDTWATENAAVPSAAAMGSGSSPHGFIWAGDLNVA 261 (341)
T ss_dssp CCEEEEEEECCCCCTTSTTHHHHHHTHHHHHHHHHHHHHHHHTTTTC----------CCSCEEEEEEECCCC
T ss_pred CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 878998643566656530356778999999999999998766421012103444440467755871560245