HHsearch results for GI: 254780797 and protein with PDBid: 2a40_B
>2a40_B Deoxyribonuclease-1; WAVE, WH2, WAsp, actin, DNAse I, ARP2/3, structural protein; HET: HIC NAG ATP; 1.80A {Bos taurus} SCOP: d.151.1.1 PDB: 1dnk_A* 2a3z_B* 2a41_B* 2a42_B* 2d1k_B* 2dnj_A* 3cjc_D* 3dni_A* 1atn_D*
Probab=99.84 E-value=1.2e-19 Score=122.03 Aligned_cols=166 Identities=15% Similarity=0.160 Sum_probs=92.2
Q ss_pred EEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHH----C--CCCCEEEEEE
Q ss_conf 899887310076777556667666687999999999997518989999727998--8999872----6--2322167740
Q gi|254780797|r 7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSY--EAIKRVF----P--NDKWDILYSG 78 (231)
Q Consensus 7 lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~--~~~~~~~----~--~~~~~~~~~~ 78 (231)
|||+||||++|+.. ..+..+.++.|++.++ +|||||||||.+. ..+..++ . ...|.+....
T Consensus 1 lrI~swNi~~~g~~---------~~~~~~~~~~i~~~~~--~~DIv~LQEv~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 69 (260)
T 2a40_B 1 LKIAAFNIRTFGET---------KMSNATLASYIVRIVR--RYDIVLIQEVRDSHLVAVGKLLDYLNQDDPNTYHYVVSE 69 (260)
T ss_dssp CEEEEEEEEEESHH---------HHHSHHHHHHHHHHHT--TCSEEEEEEECCTTSHHHHHHHHHHTSSSTTSCEEEECC
T ss_pred CEEEEEECCCCCCC---------CCCHHHHHHHHHHHCC--CCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCEEEEECC
T ss_conf 98999966834778---------6663999999999727--999899994224777189999987663258841688557
Q ss_pred CC-CCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEE---CCEEEEEEEEEECCCCCCCCCCCHHH
Q ss_conf 35-787650356886146410100001221467565544575049999984---99789999975116888875430025
Q gi|254780797|r 79 SN-TDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEV---DGRKIWLLDIHLKSFCFLDSIEDSYI 154 (231)
Q Consensus 79 ~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~---~g~~~~v~n~HL~s~~~~~~~~~~~~ 154 (231)
.. ........++.+..........................|.++...+.. .++.+.++++|+++..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~h~~~~~---------- 139 (260)
T 2a40_B 70 PLGRNSYKERYLFLFRPNKVSVLDTYQYDDGCESCGNDSFSREPAVVKFSSHSTKVKEFAIVALHSAPSD---------- 139 (260)
T ss_dssp CBCSSSCCBEEEEEECTTTCEEEEEEECCTTSTTTHHHHCSSCCEEEEEECTTSSSSEEEEEECCCCGGG----------
T ss_pred CCCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEEEEEECCCCCC----------
T ss_conf 7776655745799960553046652012456667755433311027889852677358999850478632----------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 457887548999999999740488789999136888462222
Q gi|254780797|r 155 SSCYMLNLQATWLKQWVDQKNNLNMPFIIAGDFNRKINHSHS 196 (231)
Q Consensus 155 ~~~~~~~~q~~~l~~~i~~~~~~~~~vii~GDFN~~~~~~~~ 196 (231)
...+..++..+.+.+.+ ..++.|+|+|||||..+.+...
T Consensus 140 --~~~~~~~~~~~~~~~~~-~~~~~~~iv~GDfN~~~~~~~~ 178 (260)
T 2a40_B 140 --AVAEINSLYDVYLDVQQ-KWHLNDVMLMGDFNADCSYVTS 178 (260)
T ss_dssp --HHHHHHHHHHHHHHHHH-HHCCCCEEEEEECCCSTTTSCG
T ss_pred --HHHHHHHHHHHHHHHHH-HCCCCCEEEECCCCCCCCCCHH
T ss_conf --48999999999999986-3658888994666667775257