HHsearch results for GI: 254780797 and protein with PDBid: 3g6s_A
>3g6s_A Putative endonuclease/exonuclease/phosphatase family protein; alpha-beta protein, structural genomics, PSI-2; 2.50A {Bacteroides vulgatus atcc 8482}
Probab=99.79 E-value=8e-18 Score=112.28 Aligned_cols=168 Identities=15% Similarity=0.116 Sum_probs=90.9
Q ss_pred CEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHH--HHHHHHCCCCCEEEEEECCCC
Q ss_conf 548998873100767775566676666879999999999975189899997279988--999872623221677403578
Q gi|254780797|r 5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYE--AIKRVFPNDKWDILYSGSNTD 82 (231)
Q Consensus 5 ~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (231)
++|||+||||++..... ....++.+.+.|+++|+..+|||||||||.... .+...+....|.+.. .....
T Consensus 2 ~~lri~TyNI~~~~~~d-------~~~~~~~R~~~i~~~i~~~~~DIi~LQEv~~~~~~~l~~~l~~~~~~~~~-~~~~~ 73 (267)
T 3g6s_A 2 TDVRWATFNIRYDNPQD-------SLNNWQYRKDRVCQFIKDHELDIVGMQEVLHNQFQDLRAGLPEYDGIGVG-RDDGK 73 (267)
T ss_dssp EEEEEEEEECCCCCGGG-------GGGSGGGTHHHHHHHHHHTTCSEEEEESBCHHHHHHHHHHCTTEEEECCC-TTTSS
T ss_pred CCEEEEEEECCCCCCCC-------CCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEE-CCCCC
T ss_conf 96499989578388885-------53689999999999998379999999857668989999861006505674-14667
Q ss_pred CCCCEEEEEEECCCCEEEEEECCCCCC------CCCCCCCCCCEEEEEEEE--ECCEEEEEEEEEECCCCCCCCCCCHHH
Q ss_conf 765035688614641010000122146------756554457504999998--499789999975116888875430025
Q gi|254780797|r 83 KHAMHTAIVIRKGAIHLLQKSYLPMDT------EGLDSKAGKRRAVEILFE--VDGRKIWLLDIHLKSFCFLDSIEDSYI 154 (231)
Q Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~r~~~~~~~~--~~g~~~~v~n~HL~s~~~~~~~~~~~~ 154 (231)
..+...++++................. .........+......+. ..+....++++|.....
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 143 (267)
T 3g6s_A 74 TAGEYAPLFYRKDKYEVLDSNTFWLAENPDSVGMMGWDAVCVRIATWAKFKDKATGKIFMAVNTHFDHVG---------- 143 (267)
T ss_dssp SSSCBCCEEEETTTEEEEEEEEEESSSCTTSTTCCCTTCSSCCEEEEEEEEETTTCCEEEEEEEECCSSC----------
T ss_pred CCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEECCCCCCH----------
T ss_conf 7872148999677563554201014654222121133344430467886420588824789732454210----------
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC
Q ss_conf 457887548999999999740488789999136888462
Q gi|254780797|r 155 SSCYMLNLQATWLKQWVDQKNNLNMPFIIAGDFNRKINH 193 (231)
Q Consensus 155 ~~~~~~~~q~~~l~~~i~~~~~~~~~vii~GDFN~~~~~ 193 (231)
...+..|.....+... ....+.|+|++||||.....
T Consensus 144 --~~~~~~~~~~~~~~~~-~~~~~~~~i~~GDfN~~~~~ 179 (267)
T 3g6s_A 144 --EEARRQSALLIIRKIK-EIVGERPAVVTGDFNVTDAS 179 (267)
T ss_dssp --HHHHHHHHHHHHHHHH-HHTTTSCEEEEEECSSCTTS
T ss_pred --HHHHHHHHHHHHHHHH-HHCCCCCCEECCCCCCCCCC
T ss_conf --1678999999998765-30268972132667889766