HHSEARCH alignment of GI: 254780797 and SCOP domain: d1zwxa1

Alignment
>d1zwxa1 d.151.1.3 (A:41-333) Sphingomyelin phosphodiesterase C {Listeria ivanovii [TaxId: 1638]}
Probab=99.93  E-value=4.9e-25  Score=149.44  Aligned_cols=178  Identities=16%  Similarity=0.112  Sum_probs=110.2

Q ss_pred             CEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCC--CCEEEEEECCCC
Q ss_conf             548998873100767775566676666879999999999975189899997279988999872623--221677403578
Q gi|254780797|r    5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAIKRVFPND--KWDILYSGSNTD   82 (231)
Q Consensus         5 ~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~~~~~~~~~~~--~~~~~~~~~~~~   82 (231)
                      +.|||+||||.++.....      ......++.+.|++.|...+|||||||||.+......+....  .|.+........
T Consensus         3 ~~lki~s~Nv~~~~~~~~------~~~~~~~r~~~i~~~i~~~~~DVi~LQEv~~~~~~~~l~~~~~~~~~~~~~~~~~~   76 (293)
T d1zwxa1           3 GNFKITSHNVYLFSRNIY------PNWGQMHRADLIAQADYMKNNDVVILNEAFDTSASHRLLNNLREMYPHQTPVIGRS   76 (293)
T ss_dssp             CSCEEEEEEEEECCTTTS------TTSCHHHHHHHHHTSGGGSSCSEEEEEEECSHHHHHHHHHHTTTTCCEECCCTTSC
T ss_pred             CCCEEEEEECCCCCCCCC------CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEHHCCCC
T ss_conf             977899884685765558------98278999999999997569988999846774258999987765414000001134


Q ss_pred             CC-------------CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCC
Q ss_conf             76-------------50356886146410100001221467565544575049999984997899999751168888754
Q gi|254780797|r   83 KH-------------AMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSI  149 (231)
Q Consensus        83 ~~-------------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~  149 (231)
                      ..             ....|+++.++.. .......+............++++.+.+..+|..++|+++||+++......
T Consensus        77 ~~~~~~~~~~~~~~~~~~~g~~ilsr~p-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~~~  155 (293)
T d1zwxa1          77 KHGWDKTEGNYSNFALEDGGVAVVSQWP-IVEKSQHIFQRGGGADRLSNKGFAYVKIMKNGKPYHIIGTHTQADDSLISK  155 (293)
T ss_dssp             STTCSEEEC-----CCBCCCCEEEESSC-EEEEEEEECSCCCGGGGGBCCEEEEEEEEETTEEEEEEEEECCCCCTTSCH
T ss_pred             CCCCCCCCCCCCCCCCCCCCEEEEECCC-CCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCCCCH
T ss_conf             5432211145443201266269996467-544215652024542001341489999963993479998441036775303


Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEEEECCCCCCC
Q ss_conf             3002545788754899999999974-0488789999136888462
Q gi|254780797|r  150 EDSYISSCYMLNLQATWLKQWVDQK-NNLNMPFIIAGDFNRKINH  193 (231)
Q Consensus       150 ~~~~~~~~~~~~~q~~~l~~~i~~~-~~~~~~vii~GDFN~~~~~  193 (231)
                          ......|..|++++.+++.+. ...+.|+|||||||..+.+
T Consensus       156 ----~~~~~~r~~~~~~~~~~~~~~~~~~~~~vil~GDfN~~~~~  196 (293)
T d1zwxa1         156 ----DTSRAIRAEQMQEIQTFIAKKNIPKDEIIFIGGDLNVNYGT  196 (293)
T ss_dssp             ----HHHHHHHHHHHHHHHHHHHHHTCCTTSEEEEEEECCCCTTS
T ss_pred             ----HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
T ss_conf             ----57799999989886545554036889848998066989885


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Listeria ivanovii [TaxId: 1638]