HHSEARCH alignment of GI: 254780797 and SCOP domain: d2ddra1

Alignment
>d2ddra1 d.151.1.3 (A:7-305) Sphingomyelin phosphodiesterase C {Bacillus cereus [TaxId: 1396]}
Probab=99.93  E-value=1.7e-24  Score=146.48  Aligned_cols=181  Identities=13%  Similarity=0.078  Sum_probs=108.0

Q ss_pred             CCEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCC--CCCEEEEEECCC
Q ss_conf             654899887310076777556667666687999999999997518989999727998899987262--322167740357
Q gi|254780797|r    4 AQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAIKRVFPN--DKWDILYSGSNT   81 (231)
Q Consensus         4 ~~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~~~~~~~~~~--~~~~~~~~~~~~   81 (231)
                      .++||||||||.++.....    +  .....++.+.|++.|...+|||||||||.+......+...  ..+.+.+.....
T Consensus         1 ~~tl~v~s~Nv~~~~~~~~----~--~~~~~~r~~~i~~~i~~~~~DIi~LQEv~~~~~~~~~~~~l~~~~~~~~~~~~~   74 (299)
T d2ddra1           1 NDTLKVMTHNVYMLSTNLY----P--NWGQTERADLIGAADYIKNQDVVILNEVFDNSASDRLLGNLKKEYPNQTAVLGR   74 (299)
T ss_dssp             CCEEEEEEEEEEECCTTTC----T--TSCHHHHHHHHHHCSTTCSCSEEEEEEECCHHHHHHHHHHHTTTCCEECCCTTS
T ss_pred             CCCEEEEEEECCCCCCCCC----C--CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEECCC
T ss_conf             9966999877884654668----8--727889999999998756998899992677652788888888756740332134


Q ss_pred             CCCC--------------CEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCC
Q ss_conf             8765--------------03568861464101000012214675655445750499999849978999997511688887
Q gi|254780797|r   82 DKHA--------------MHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLD  147 (231)
Q Consensus        82 ~~~~--------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~  147 (231)
                      ....              ...|+++..+...... ................+.++.+.+..++..++|+|+||+++....
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~g~~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~Hl~~~~~~~  153 (299)
T d2ddra1          75 SSGSEWDKTLGNYSSSTPEDGGVAIVSKWPIAEK-IQYVFAKGCGPDNLSNKGFVYTKIKKNDRFVHVIGTHLQAEDSMC  153 (299)
T ss_dssp             CCSTTSSEEEESCCTTCSSCCCCEEEESSCEEEE-EEEECSCCC----CCCCEEEEEEEEETTEEEEEEEEECCCC----
T ss_pred             CCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCC-EEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEECCCCCCCCCC
T ss_conf             5555554023012343102641699998611131-345531135755434206999998069808999972466787753


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHH-CCCCCCEEEEEECCCCCCCCC
Q ss_conf             543002545788754899999999974-048878999913688846222
Q gi|254780797|r  148 SIEDSYISSCYMLNLQATWLKQWVDQK-NNLNMPFIIAGDFNRKINHSH  195 (231)
Q Consensus       148 ~~~~~~~~~~~~~~~q~~~l~~~i~~~-~~~~~~vii~GDFN~~~~~~~  195 (231)
                      ..    ......|..|+..+.+++... ...+.|+|+|||||..+....
T Consensus       154 ~~----~~~~~~r~~q~~~~~~~~~~~~~~~~~~vi~~GDfN~~~~~~~  198 (299)
T d2ddra1         154 GK----TSPASVRTNQLKEIQDFIKNKNIPNNEYVLIGGDMNVNKINAE  198 (299)
T ss_dssp             -------CHHHHHHHHHHHHHHHHHHHTCCTTSCEEEEEECCCCCTTTS
T ss_pred             CH----HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHH
T ss_conf             10----2468899999998765655420256651799723788865144


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: Sphingomyelin phosphodiesterase-like
domain: Sphingomyelin phosphodiesterase C
species: Bacillus cereus [TaxId: 1396]