PSIBLAST alignment of GI: 254780797 and protein with PDB id: 1bix
>gi|157830335|pdb|1BIX|A Chain A, The Crystal Structure Of The Human Dna Repair Endonuclease Hap1 Suggests The Recognition Of Extra-Helical Deoxyribose At Dna Abasic Sites Length = 287
Score = 54.1 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/220 (10%), Positives = 63/220 (28%), Gaps = 45/220 (20%)
Query: 6 RIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYE---- 61
++I SWN++ L + ++ DI+CLQE E
Sbjct: 30 TLKICSWNVDGLRAWIKKKG---------------LDWVKEEAPDILCLQETKCSENKLP 74
Query: 62 AIKRVFPNDKWDILYSGSNTDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRA 121
A + P + S+ + ++ ++ R+ + + + R
Sbjct: 75 AELQELPGLSHQYWSAPSDKEGYSG-VGLLSRQCPLKVS------YGIGDEEHDQEGR-- 125
Query: 122 VEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKNNLNMPF 181
+ + L+ ++ + + ++++ + P
Sbjct: 126 ---VIVAEFDSFVLVTAYVPNAGRG-------LVRLEYRQRWDEAFRKFLKGLASRK-PL 174
Query: 182 IIAGDFNRKINHSHSGIKDELWQKINQDNTLMRLPHKKNH 221
++ GD N H +++ P ++
Sbjct: 175 VLCGDLNV--AHEEIDLRNP----KGNKKNAGFTPQERQG 208