PSIBLAST alignment of GI: 254780797 and protein with PDB id: 2v0r
>gi|152149537|pdb|2V0R|A Chain A, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of The Targeting Line-1 Retrotransposon Endonuclease Length = 240
>gi|152149538|pdb|2V0R|B Chain B, Crystal Structure Of A Hairpin Exchange Variant (Ltx) Of The Targeting Line-1 Retrotransposon Endonuclease Length = 240
Score = 46.0 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/244 (11%), Positives = 70/244 (28%), Gaps = 61/244 (25%)
Query: 7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAIKRV 66
I I + NIN L+ L + + D + C+QE
Sbjct: 8 ITILTLNINGLN--------------SAIKRHRLASWIKSQDPSVCCIQET--------- 44
Query: 67 FPNDKWDILYSGSNTDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILF 126
+ + ++ A +K A + S + + + +
Sbjct: 45 --HLTCRDTHRLKIKGWRKIYQANGKQKKAGVAILVSDKTDFKPTKIKRDKEGHYIMVKG 102
Query: 127 EVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKNNLNMPFIIAGD 186
+ ++ +L+I+ + L + +L+ +I GD
Sbjct: 103 SIQQEELTILNIYAPNTGAP--------------RFIKQVLSDL---QRDLDSHTLIMGD 145
Query: 187 FNRKINHSHSGIKD-------------------ELWQKINQDNTLMRLPHKKNHNAIRTK 227
FN ++ + ++++ ++ +T ++ + ++K
Sbjct: 146 FNTPLSTLDRSTRQKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTYVRVRDGHVSQSK 205
Query: 228 ILKI 231
I I
Sbjct: 206 IDHI 209