RPSBLAST alignment of GI: 254780797 and protein with PDBid: 1hd7
>1hd7_A DNA-(apurinic or apyrimidinic site) lyase; DNA repair, endonuclease, APE1, HAP1, REF-1; 1.95A {Homo sapiens} SCOP: d.151.1.1 PDB: 1e9n_A 2isi_A Length = 318
Score = 37.2 bits (85), Expect = 0.003
Identities = 20/185 (10%), Positives = 49/185 (26%), Gaps = 35/185 (18%)
Query: 7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAI--K 64
++I SWN++ L + I++ + ++ DI+CLQE E
Sbjct: 62 LKICSWNVDGL----------RAWIKKK-----GLDWVKEEAPDILCLQETKCSENKLPA 106
Query: 65 RVFPNDKWDILYSGSNTDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEI 124
+ Y + +DK ++ + + + +
Sbjct: 107 ELQELPGLSHQYWSAPSDKEGYSGVGLLSRQCPLKVSYGIGDEEHD-------------- 152
Query: 125 LFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKNNLNMPFIIA 184
++ + + + + + P ++
Sbjct: 153 ----QEGRVIVAEFDSFVLVTAYVPNAGRGLVRLEYRQRWDEAFRKFLKGLASRKPLVLC 208
Query: 185 GDFNR 189
GD N
Sbjct: 209 GDLNV 213