RPSBLAST alignment of GI: 254780797 and protein with PDBid: 3i41
>3i41_A Beta-hemolysin; beta toxin, sphingomyelinase, toxin; 1.75A {Staphylococcus aureus RN4220} PDB: 3i46_A 3i48_A Length = 317
Score = 61.9 bits (149), Expect = 1e-10
Identities = 28/223 (12%), Positives = 65/223 (29%), Gaps = 28/223 (12%)
Query: 5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAIK 64
+++ S N+ LS + L+ + + + D+V E A
Sbjct: 28 TDLKLVSHNVYMLSTVLYPN------WGQYKRADLIGQSSYIKNNDVVIFNEAFDNGASD 81
Query: 65 RVFPNDKWDILYSGSNTDKHAMHTAIVIRKGA--------------IHLLQKSYLPMDTE 110
++ N K + Y + + + +K +
Sbjct: 82 KLLSNVKKEYPYQTPVLGRSQSGWDKTEGSYSSTVAEDGGVAIVSKYPIKEKIQHVFKSG 141
Query: 111 GLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQW 170
+ V E +G+ + ++ H +S + Q + +
Sbjct: 142 CGFDNDSNKGFVYTKIEKNGKNVHVIGTHTQSEDSRCGAGHDR----KIRAEQMKEISDF 197
Query: 171 VDQKNNLN-MPFIIAGDFNRKINHSHSGIKDELWQKINQDNTL 212
V +KN I GD N + + ++ + +N ++ L
Sbjct: 198 VKKKNIPKDETVYIGGDLN---VNKGTPEFKDMLKNLNVNDVL 237