HHsearch alignment for GI: 254780798 and conserved domain: COG3026

>COG3026 RseB Negative regulator of sigma E activity [Signal transduction mechanisms].
Probab=96.48  E-value=0.055  Score=30.17  Aligned_cols=183  Identities=10%  Similarity=0.043  Sum_probs=96.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEE----EECCCEEEEEECCC
Q ss_conf             89999999999999999974034443101799999986126706999999618955999999----96698699997166
Q gi|254780798|r    6 YKSVIGVVILFFYSAIFPFNAAYPITKDQSVKKAIEHFLSIQTMQGTFLQEDAGYVMKGEFF----MARPSKFYFKYSSP   81 (204)
Q Consensus         6 mk~i~~~~i~~~~~~~~~~~a~~~~~~~~~~~~i~~~l~~~~t~~a~F~Q~~~~~~~~G~~~----~kkP~k~rw~y~~P   81 (204)
T Consensus         1 mk~l~~s~~ll~~sl~~s~~a~ae~~s~~~L~km~~A~~~-lnYe~sfv~~~~~~m~slryrH~~~D~~~-~aqLl~LDG   78 (320)
T COG3026           1 MKQLWFSLLLLLGSLLLSAAASAESASAAWLQKMNEASQS-LNYELSFVYTRKQGMESLRYRHARLDNKP-LAQLLQLDG   78 (320)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-CCCEEEEEEECCCCCCCCEEEEEHHCCCH-HHHHHHCCC
T ss_conf             9237899999999986104430468658999999998873-67279999986887640123321115727-888874257


Q ss_pred             CEEEEEEECEEEEEEECCCCCCCCHH---HHHHHHHHHCCHHHHHHHH-CCCCC---CCCCCE-EEEECCCCCCCCEEEE
Q ss_conf             41577751205999713334321011---1111233210001212221-01132---235727-9972046666634799
Q gi|254780798|r   82 SSVSLISDGSNIAVYNAKLDTWSVYP---LRYMAFSVIFSNNQHVIQE-SIQRV---ESNNSF-ITIFFKDDFMGNMISV  153 (204)
Q Consensus        82 ~~~~iv~~g~~l~~~d~~~~q~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~-~~~~~~~~~~~~~i~l  153 (204)
T Consensus        79 ~~rEvvrr~n~vsyf~pg~~~ft~~~~~i~ds~Pal~~tdf~~Ls~~YDf~~vGr~RVAgr~c~virvvpkD~~RY~Y~v  158 (320)
T COG3026          79 PRREVVRRGNEVSYFEPGLEPFTLNGDYIVDSLPALLNTDFKRLSSYYDFRKVGRTRVAGRLCEVIRVVPKDGFRYSYIV  158 (320)
T ss_pred             CCEEEEEECCEEEEECCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHCCHHHCCHHHHCCCCEEEEEECCCCCCEEEEEE
T ss_conf             41035663888876337754055136430333178873698786432127550655525871048997358885689999


Q ss_pred             EEECCCCEEEEEEEEECCCCEE-EEEEEEEECCCCCCH
Q ss_conf             9936984299999996799879-999974322886896
Q gi|254780798|r  154 TFDRLSYRLLNWKIMDSSRRYS-IIKILKYKENTVLDP  190 (204)
Q Consensus       154 ~f~~~~~~l~~~~i~D~~G~~t-~i~f~ni~~N~~i~~  190 (204)
T Consensus       159 w~D~~s~LplrsdlLdrdG~~LEQfrvi~~~vg~~~~~  196 (320)
T COG3026         159 WLDEESGLPLRSDLLDRDGELLEQFRVIQFNVGDPLQG  196 (320)
T ss_pred             EEECCCCCCHHHHHHCCCCCEEEEEEEEEEEECCCHHH
T ss_conf             97446797013565166530531288999984771289