HHsearch alignment for GI: 254780798 and conserved domain: pfam03548

>pfam03548 LolA Outer membrane lipoprotein carrier protein LolA.
Probab=100.00  E-value=1.7e-32  Score=202.12  Aligned_cols=152  Identities=20%  Similarity=0.367  Sum_probs=124.0

Q ss_pred             HCCCEEEEEEEEEECC------CEEEEEEEEECCCEEEEEECCCCEEEEEEECEEEEEEECCCCCCCCHHH----HHHHH
Q ss_conf             1267069999996189------5599999996698699997166415777512059997133343210111----11123
Q gi|254780798|r   44 LSIQTMQGTFLQEDAG------YVMKGEFFMARPSKFYFKYSSPSSVSLISDGSNIAVYNAKLDTWSVYPL----RYMAF  113 (204)
Q Consensus        44 ~~~~t~~a~F~Q~~~~------~~~~G~~~~kkP~k~rw~y~~P~~~~iv~~g~~l~~~d~~~~q~~~~~~----~~~~~  113 (204)
T Consensus         1 ~~i~t~~a~F~Q~~~~~~~~~~~~s~G~~~~kkP~~~rw~y~~P~~~~ii~dg~~l~~yd~~~~qv~~~~~~~~~~~~~~   80 (164)
T pfam03548         1 SKVKTFSADFVQTVTSGEGKVIQEGSGTFYIKRPGLFRWEYDAPDEQLIVSDGKTVWIYDPDLEQVTIYWLKQALSNTPF   80 (164)
T ss_pred             CCCCEEEEEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEEEECCCCCEEEECCHHHHCCCCHH
T ss_conf             97538999999998668886357778999997698899998798702899948799998563458886110300024768


Q ss_pred             HHHCCHHHHHHHHCCCCC--CCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCHH
Q ss_conf             321000121222101132--235727997204666663479999369842999999967998799999743228868965
Q gi|254780798|r  114 SVIFSNNQHVIQESIQRV--ESNNSFITIFFKDDFMGNMISVTFDRLSYRLLNWKIMDSSRRYSIIKILKYKENTVLDPK  191 (204)
Q Consensus       114 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l~~~~i~D~~G~~t~i~f~ni~~N~~i~~~  191 (204)
T Consensus        81 ~~l~~~~~~~~~~f~i~~~~~~~~~~~l~p~~~~~~~~~i~i~f~~~~-~l~~i~i~d~~g~~t~i~f~~~~~N~~i~~~  159 (164)
T pfam03548        81 VLLLRDKIKLDGQYNVTEEEGDLDTFTLKPKAKDVGLSQIRIGFDKKG-VLRQFTVVDQDGQRTTITFSNVKTNPTLADD  159 (164)
T ss_pred             HHHHCCHHHHHHCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCC-EEEEEEEEECCCCEEEEEEEEEEECCCCCCC
T ss_conf             988568246431327999327872899974588778549999998999-0999999979989999999953628998701


Q ss_pred             HCCCC
Q ss_conf             51268
Q gi|254780798|r  192 VFEIP  196 (204)
Q Consensus       192 ~F~f~  196 (204)
T Consensus       160 ~F~Ft  164 (164)
T pfam03548       160 LFKFT  164 (164)
T ss_pred             EEEEC
T ss_conf             44769