HHsearch alignment for GI: 254780798 and conserved domain: pfam03548
>pfam03548 LolA Outer membrane lipoprotein carrier protein LolA.
Probab=100.00 E-value=1.7e-32 Score=202.12 Aligned_cols=152 Identities=20% Similarity=0.367 Sum_probs=124.0
Q ss_pred HCCCEEEEEEEEEECC------CEEEEEEEEECCCEEEEEECCCCEEEEEEECEEEEEEECCCCCCCCHHH----HHHHH
Q ss_conf 1267069999996189------5599999996698699997166415777512059997133343210111----11123
Q gi|254780798|r 44 LSIQTMQGTFLQEDAG------YVMKGEFFMARPSKFYFKYSSPSSVSLISDGSNIAVYNAKLDTWSVYPL----RYMAF 113 (204)
Q Consensus 44 ~~~~t~~a~F~Q~~~~------~~~~G~~~~kkP~k~rw~y~~P~~~~iv~~g~~l~~~d~~~~q~~~~~~----~~~~~ 113 (204)
T Consensus 1 ~~i~t~~a~F~Q~~~~~~~~~~~~s~G~~~~kkP~~~rw~y~~P~~~~ii~dg~~l~~yd~~~~qv~~~~~~~~~~~~~~ 80 (164)
T pfam03548 1 SKVKTFSADFVQTVTSGEGKVIQEGSGTFYIKRPGLFRWEYDAPDEQLIVSDGKTVWIYDPDLEQVTIYWLKQALSNTPF 80 (164)
T ss_pred CCCCEEEEEEEEEEECCCCCEEEEEEEEEEEECCCEEEEEECCCCCEEEEECCCEEEEECCCCCEEEECCHHHHCCCCHH
T ss_conf 97538999999998668886357778999997698899998798702899948799998563458886110300024768
Q ss_pred HHHCCHHHHHHHHCCCCC--CCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEECCCCCCHH
Q ss_conf 321000121222101132--235727997204666663479999369842999999967998799999743228868965
Q gi|254780798|r 114 SVIFSNNQHVIQESIQRV--ESNNSFITIFFKDDFMGNMISVTFDRLSYRLLNWKIMDSSRRYSIIKILKYKENTVLDPK 191 (204)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l~~~~i~D~~G~~t~i~f~ni~~N~~i~~~ 191 (204)
T Consensus 81 ~~l~~~~~~~~~~f~i~~~~~~~~~~~l~p~~~~~~~~~i~i~f~~~~-~l~~i~i~d~~g~~t~i~f~~~~~N~~i~~~ 159 (164)
T pfam03548 81 VLLLRDKIKLDGQYNVTEEEGDLDTFTLKPKAKDVGLSQIRIGFDKKG-VLRQFTVVDQDGQRTTITFSNVKTNPTLADD 159 (164)
T ss_pred HHHHCCHHHHHHCCEEEEECCCCCEEEEEECCCCCCCCEEEEEECCCC-EEEEEEEEECCCCEEEEEEEEEEECCCCCCC
T ss_conf 988568246431327999327872899974588778549999998999-0999999979989999999953628998701
Q ss_pred HCCCC
Q ss_conf 51268
Q gi|254780798|r 192 VFEIP 196 (204)
Q Consensus 192 ~F~f~ 196 (204)
T Consensus 160 ~F~Ft 164 (164)
T pfam03548 160 LFKFT 164 (164)
T ss_pred EEEEC
T ss_conf 44769