HHSEARCH alignment of GI: 254780798 and SCOP domain: d1iwla_

Alignment
>d1iwla_ b.125.1.1 (A:) Outer-membrane lipoproteins carrier protein LolA {Escherichia coli [TaxId: 562]}
Probab=99.98  E-value=2.8e-31  Score=192.72  Aligned_cols=168  Identities=14%  Similarity=0.230  Sum_probs=133.9

Q ss_pred             HHHHHHHHHHHCCCEEEEEEEEEEC------CCEEEEEEEEECCCEEEEEECCCCEEEEEEECEEEEEEECCCCCCCCHH
Q ss_conf             1799999986126706999999618------9559999999669869999716641577751205999713334321011
Q gi|254780798|r   34 QSVKKAIEHFLSIQTMQGTFLQEDA------GYVMKGEFFMARPSKFYFKYSSPSSVSLISDGSNIAVYNAKLDTWSVYP  107 (204)
Q Consensus        34 ~~~~~i~~~l~~~~t~~a~F~Q~~~------~~~~~G~~~~kkP~k~rw~y~~P~~~~iv~~g~~l~~~d~~~~q~~~~~  107 (204)
                      +++++|+++++++++|+|+|+|+..      ..+++|+|+++|||++||+|.+|.++.+|+||+++|+|+|+++++..++
T Consensus         1 D~~~~l~~~~~~~~s~~a~F~Q~~~~~~~~~~~~~~G~~~~~kP~~~r~~y~~P~~~~iv~~g~~l~~~~~~~~~~~~~~   80 (182)
T d1iwla_           1 DAASDLKSRLDKVSSFHASFTQKVTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATW   80 (182)
T ss_dssp             CHHHHHHHHTTSCSEEEEEEEEEEEC-----CEEEEEEEEEETTTEEEEEECSSSCEEEEEESSEEEEEEGGGTEEEEEE
T ss_pred             CHHHHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEEEEEEEECCEEEEEECCCCCEEEEEECCEEEEECCCCCCCCCCC
T ss_conf             97899999984547389999999975788704789999999809979999815563047850437899535555110024


Q ss_pred             HHHHHHH----HHCCHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCEEEEEEEEEE
Q ss_conf             1111233----210001212221011322357279972046666634799993698429999999679987999997432
Q gi|254780798|r  108 LRYMAFS----VIFSNNQHVIQESIQRVESNNSFITIFFKDDFMGNMISVTFDRLSYRLLNWKIMDSSRRYSIIKILKYK  183 (204)
Q Consensus       108 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l~~~~i~D~~G~~t~i~f~ni~  183 (204)
                      +......    ++.+........ ...........+.+.+.......+.|.|+.++ .+++|++.|..|++|++.|++ +
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~i~l~~~~~~-~l~~i~~~d~~g~~t~i~f~~-~  157 (182)
T d1iwla_          81 LKDATGNTPFMLIARNQSSDWQQ-YNIKQNGDDFVLTPKASNGNLKQFTINVGRDG-TIHQFSAVEQDDQRSSYQLKS-Q  157 (182)
T ss_dssp             GGGCCCCSHHHHHHHCCHHHHTT-EEEEEETTEEEEEESSSSCSEEEEEEEECTTC-CEEEEEEEETTCCEEEEEEEE-E
T ss_pred             CCHHHHCCHHHHHHCCCHHHHHH-HCCCCCCEEEEEEECCCCCCCCEEEEEECCCC-CEEEEEEEECCCCEEEEEEEC-C
T ss_conf             00000015466652120223221-10024430599962487766538999997999-689999998898999999981-0


Q ss_pred             CCCCCCHHHCCC-CCCCCCCCC
Q ss_conf             288689655126-853134489
Q gi|254780798|r  184 ENTVLDPKVFEI-PYDKIHNIN  204 (204)
Q Consensus       184 ~N~~i~~~~F~f-~~~~~~~~~  204 (204)
                      .|+++++++|+| |++++.+|+
T Consensus       158 ~n~~i~~~~F~f~~P~~~eVid  179 (182)
T d1iwla_         158 QNGAVDAAKFTFTPPQGVTVDD  179 (182)
T ss_dssp             EESCCCGGGGSCCCCSSCEEEE
T ss_pred             CCCCCCHHHEEECCCCCCEEEE
T ss_conf             6899997678787959986870


SCOP domain information

class: All beta proteins
fold: LolA-like prokaryotic lipoproteins and lipoprotein localization factors
superfamily: Prokaryotic lipoproteins and lipoprotein localization factors
family: Outer-membrane lipoproteins carrier protein LolA
domain: Outer-membrane lipoproteins carrier protein LolA
species: Escherichia coli [TaxId: 562]