HHsearch alignment for GI: 254780799 and conserved domain: PRK13721
>PRK13721 conjugal transfer ATP-binding protein TraC; Provisional.
Probab=95.24 E-value=0.024 Score=37.24 Aligned_cols=184 Identities=17% Similarity=0.191 Sum_probs=96.6
Q ss_pred CCCCCCCCEEEEECC--CCC----EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECC-----CHHH--------
Q ss_conf 045666666785410--020----235530477406799999999999829957847888523-----1001--------
Q gi|254780799|r 438 LGKSIEGKPIIADLA--RMP----HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDP-----KMLE-------- 498 (806)
Q Consensus 438 LGKdI~G~pvv~DLa--kMP----HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDP-----K~vE-------- 498 (806)
T Consensus 454 ~~r--RgQ~~~~d~F~~~~~~tN~N~~I~g~SGsGKSf~~q~l~~~~~~~----G~~V~IID~G~SY~~lc~~~gG~yi~ 527 (864)
T PRK13721 454 PTY--RNQLAFIDIFFRGMNNTNYNMAVCGTSGAGKTGLIQPLIRSVLDS----GGFAVVFDMGDGYKSLCENMGGVYLD 527 (864)
T ss_pred EEC--CCCCCEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHC----CCEEEEEECCCCHHHHHHHCCCEEEC
T ss_conf 211--686103455678999987006998289986899999999999857----99799996997899999973998866
Q ss_pred -----HHHCCCCH----H------HH----CC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH-------
Q ss_conf -----11027703----4------31----22--334304566899999999999999998708996899999-------
Q gi|254780799|r 499 -----LSVYDGIP----N------LL----TP--VVTNPQKAVTVLKWLVCEMEERYQKMSKIGVRNIDGFNL------- 550 (806)
Q Consensus 499 -----ls~Y~~iP----H------Ll----~p--VvTd~~kA~~aL~w~V~EMe~RY~l~a~~~vRni~~yN~------- 550 (806)
T Consensus 528 ~~~i~~NPF~~i~d~~~~~e~i~~ll~~masp~~~l~~~e--~~~l~~Av~~~w~~~g--~~~~iddv~~~L~~~~~~~~ 603 (864)
T PRK13721 528 GETLRFNPFANITDIDQSAERIRDQLSVMASPNGNLDEVH--EGLLLQAVRASWLAKK--NRARIDDVVDFLKNARDSEQ 603 (864)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHH--HHHHHHHHHHHHHHHC--CCCCCCHHHHHHHHCCHHHH
T ss_conf 9965468875666631046899999999838899999799--9999999999999828--98883089999873310144
Q ss_pred ---------HHHHH-------HHCCCCCCCCCCCC----CCCCCCCCCCCCCC----CCC--------------------
Q ss_conf ---------99988-------74478667754467----76545432223322----323--------------------
Q gi|254780799|r 551 ---------KVAQY-------HNTGKKFNRTVQTG----FDRKTGEAIYETEH----FDF-------------------- 586 (806)
Q Consensus 551 ---------k~~~~-------~~~~~~~~~~~~~~----~~~~~~~~~~~~~~----~~~-------------------- 586 (806)
T Consensus 604 ~~~~~~~~~r~~~l~~~L~~y~~~G~--Yg~~Fng~~~~l~~~~~fvVlEL~~Lk~~~~L~~vvl~~lm~~i~~~my~~~ 681 (864)
T PRK13721 604 YADSPTIRSRLDEMIVLLDQYTANGT--YGEYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTP 681 (864)
T ss_pred HHCCCHHHHHHHHHHHHHHHHCCCCC--CCCEECCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 41341178999999999986525898--8642059998666889889998301488767999999999999999997577
Q ss_pred CCCCEEEEEHHHHHHHHHHCCC--HHHHHHHHHHHHHHHCCEEEEEEECCCC
Q ss_conf 4698687763446888873210--0588999999866414237999965777
Q gi|254780799|r 587 QHMPYIVVVIDEMADLMMVARK--DIESAVQRLAQMARASGIHVIMATQRPS 636 (806)
Q Consensus 587 ~~lp~ivviiDElaDlmm~~~~--~ve~~i~rlaq~ara~GiHli~aTqrPs 636 (806)
T Consensus 682 R~~~k-~~iiDEAW~lL--~~~n~~~~~FIe~~yRr~RKy~Gs~i~iTQ~i~ 730 (864)
T PRK13721 682 RNLKK-LNVIDEGWRLL--DFKNHKVGEFIEKGYRTARRHTGAYITITQNIV 730 (864)
T ss_pred CCCEE-EEEEEHHHHHH--CCCCHHHHHHHHHHHHHHHHHCCEEEEEECCHH
T ss_conf 99717-99970187764--589878999999999998861866999922667