HHsearch alignment for GI: 254780799 and conserved domain: PRK13851

>PRK13851 type IV secretion system protein VirB11; Provisional.
Probab=95.68  E-value=0.0078  Score=40.86  Aligned_cols=40  Identities=45%  Similarity=0.728  Sum_probs=33.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHH
Q ss_conf             2355304774067999999999998299578478885231001110
Q gi|254780799|r  456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSV  501 (806)
Q Consensus       456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~  501 (806)
T Consensus       164 NIlIsGgTGSGKTTllnALl~~I-----P~~eRIvtIED-t~EL~l  203 (343)
T PRK13851        164 TMLLCGPTGSGKTTMSKTLISAI-----PPQERLITIED-TLELVI  203 (343)
T ss_pred             CEEEECCCCCCHHHHHHHHHHCC-----CCCCCEEEECC-CCCCCC
T ss_conf             89998889861999999999628-----96552799611-500258