HHsearch alignment for GI: 254780799 and conserved domain: cd00009
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold. The ASCE division also includes ABC, RecA-like, VirD4-like, PilT-like, and SF1/2 helicases. Members of the AAA+ ATPases function as molecular chaperons, ATPase subunits of proteases, helicases, or nucleic-acid stimulated ATPases. The AAA+ proteins contain several distinct features in addition to the conserved alpha-beta-alpha core domain structure and the Walker A and B motifs of the P-loop NTPases.
Probab=96.90 E-value=0.01 Score=39.90 Aligned_cols=58 Identities=26% Similarity=0.400 Sum_probs=38.2
Q ss_pred CCEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHH-----HHCCEEEEEEECCCCCCCCCHHHHHCCCCEEEE
Q ss_conf 986877634468888732100588999999866-----414237999965777535543554110251587
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVARKDIESAVQRLAQMA-----RASGIHVIMATQRPSVDVITGTIKANFPTRISF 654 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~~~~ve~~i~rlaq~a-----ra~GiHli~aTqrPsvdvitg~ikan~p~riaf 654 (806)
T Consensus 83 ~~~~vl~iDEi~~l----~~~~~~~~~~~l~~~~~~~~~~~~~~vI~~tn~~~~----~~~~~~~~~R~~~ 145 (151)
T cd00009 83 AKPGVLFIDEIDSL----SRGAQNALLRVLETLNDLRIDRENVRVIGATNRPLL----GDLDRALYDRLDI 145 (151)
T ss_pred CCCCEEEEECHHHC----CHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC----CCHHHHHHCCCCE
T ss_conf 69986982016655----999999999999871575406788899995289988----6837764255986