HHsearch alignment for GI: 254780799 and conserved domain: cd01131

>cd01131 PilT Pilus retraction ATPase PilT. PilT is a nucleotide binding protein responsible for the retraction of type IV pili, likely by pili disassembly. This retraction provides the force required for travel of bacteria in low water environments by a mechanism known as twitching motility.

Probab=96.36  E-value=0.0088  Score=40.45  Aligned_cols=38  Identities=34%  Similarity=0.591  Sum_probs=26.6

Q ss_pred             EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEE-ECCCHHHH
Q ss_conf             35530477406799999999999829957847888-52310011
Q gi|254780799|r  457 LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIM-IDPKMLEL  499 (806)
Q Consensus       457 LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklil-iDPK~vEl  499 (806)
T Consensus         4 iLitG~TGSGKTTtl~all~~i---~~~~~~~IiTiEDP--iE~   42 (198)
T cd01131           4 VLVTGPTGSGKSTTLAAMIDYI---NKNKTHHILTIEDP--IEF   42 (198)
T ss_pred             EEEECCCCCCHHHHHHHHHHHH---CCCCCCEEEEECCC--HHH
T ss_conf             9998999997999999999853---63788369996473--775