HHsearch alignment for GI: 254780799 and conserved domain: pfam00270
>pfam00270 DEAD DEAD/DEAH box helicase. Members of this family include the DEAD and DEAH box helicases. Helicases are involved in unwinding nucleic acids. The DEAD box helicases are involved in various aspects of RNA metabolism, including nuclear transcription, pre mRNA splicing, ribosome biogenesis, nucleocytoplasmic transport, translation, RNA decay and organellar gene expression.
Probab=91.09 E-value=1.3 Score=24.17 Aligned_cols=15 Identities=47% Similarity=0.811 Sum_probs=12.9
Q ss_pred EEEEEECCCCHHHHH
Q ss_conf 235530477406799
Q gi|254780799|r 456 HLLIAGTTGSGKSVA 470 (806)
Q Consensus 456 HLLIAGtTGSGKSV~ 470 (806)
T Consensus 16 ~~iv~~pTGsGKT~~ 30 (167)
T pfam00270 16 DVLVQAPTGSGKTLA 30 (167)
T ss_pred CEEEECCCCCCHHHH
T ss_conf 789988999758999