HHsearch alignment of GI: 254780799 and MMDB domain: 2qby_A_1-196
>2qby_A (A:1-196) CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=96.83 E-value=0.039 Score=35.13 Aligned_cols=146 Identities=19% Similarity=0.239 Sum_probs=93.2
Q ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH-HHHHCCCCHHHHCCCCCCHHH-HHHHHHHHHHHHH
Q ss_conf 20235530477406799999999999829957847888523100-111027703431223343045-6689999999999
Q gi|254780799|r 454 MPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML-ELSVYDGIPNLLTPVVTNPQK-AVTVLKWLVCEME 531 (806)
Q Consensus 454 MPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v-Els~Y~~iPHLl~pVvTd~~k-A~~aL~w~V~EMe 531 (806)
-+|+||-|..|+||+-.++++.-.+-.+..+..+....--+... ....+..+.+-+........+ ....++++....
T Consensus 45 ~~~vli~GppG~GKT~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 123 (196)
T 2qby_A 45 PNNIFIYGLTGTGKTAVVKFVLSKLHKKFLGKFKHVYINTRQIDTPYRVLADLLESLDVKVPFTGLSIAELYRRLVKAV- 123 (196)
T ss_dssp CCCEEEEECTTSSHHHHHHHHHHHHHHHTCSSCEEEEEEHHHHCSHHHHHHHHTTTTSCCCCSSSCCHHHHHHHHHHHH-
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_conf 9838998999781999999999986520389860798311441432678899987630234433256999999999988-
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCHHH
Q ss_conf 99999987089968999999998874478667754467765454322233223234698687763446888873210058
Q gi|254780799|r 532 ERYQKMSKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLMMVARKDIE 611 (806)
Q Consensus 532 ~RY~l~a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlmm~~~~~ve 611 (806)
.+...+.++++||+-.+.......+-
T Consensus 124 ------------------------------------------------------~~~~~~~~~~iDe~~~~~~~~~~~~l 149 (196)
T 2qby_A 124 ------------------------------------------------------RDYGSQVVIVLDEIDAFVKKYNDDIL 149 (196)
T ss_dssp ------------------------------------------------------HTCCSCEEEEEETHHHHHHSSCSTHH
T ss_pred ------------------------------------------------------HHCCCCCEEEEECCCHHHHHHHHHHH
T ss_conf ------------------------------------------------------75068761665222112121000689
Q ss_pred HHHHHHHHHHHHCCEEEEEEECCCC-CCCCCHHHHHCCC-CEEEE
Q ss_conf 8999999866414237999965777-5355435541102-51587
Q gi|254780799|r 612 SAVQRLAQMARASGIHVIMATQRPS-VDVITGTIKANFP-TRISF 654 (806)
Q Consensus 612 ~~i~rlaq~ara~GiHli~aTqrPs-vdvitg~ikan~p-~riaf 654 (806)
..+.++-......++-+|.+|.|.. .+-+..-++.-|- .+|-|
T Consensus 150 ~~l~~~~~~~~~~~vi~I~~tn~~~~~~~l~~~l~~R~~~~~i~~ 194 (196)
T 2qby_A 150 YKLSRINSEVNKSKISFIGITNDVKFVDLLDPRVKSSLSEEEIIF 194 (196)
T ss_dssp HHHHHHHHSCCC--EEEEEEESCGGGGGGCTTHHHHTTTTEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEECCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 999886776417856999605854432001452011345543346