HHsearch results for GI: 254780799 and protein with PDBid: 1fnn_A
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=93.00 E-value=0.26 Score=27.82 Aligned_cols=75 Identities=20% Similarity=0.172 Sum_probs=41.7
Q ss_pred CCEEEEEHHHHHHHHHHCCCHHHHHHHHHHH---HHHHCCEEEEEEECCCC-CCCCCHHHHH-CCCCEEEEEECCCCCCH
Q ss_conf 9868776344688887321005889999998---66414237999965777-5355435541-10251587645866421
Q gi|254780799|r 589 MPYIVVVIDEMADLMMVARKDIESAVQRLAQ---MARASGIHVIMATQRPS-VDVITGTIKA-NFPTRISFQVSSKIDSR 663 (806)
Q Consensus 589 lp~ivviiDElaDlmm~~~~~ve~~i~rlaq---~ara~GiHli~aTqrPs-vdvitg~ika-n~p~riaf~v~s~~dSr 663 (806)
-+++++++||+-+|- ... .....++.+ .-....+.+|.+|+.+. .+.+-.-++. ..|.++-|.--+.-+-+
T Consensus 124 ~~~~~~~lde~~~l~---~~~-~~~~~~~~~~~~~~~~~~~~~I~~~~~~~~~~~~~~~~~~~~~~~~i~~~p~~~~~l~ 199 (389)
T 1fnn_A 124 DLYMFLVLDDAFNLA---PDI-LSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIF 199 (389)
T ss_dssp TCCEEEEEETGGGSC---HHH-HHHHHHHTTCHHHHSSCCEEEEEEESSTHHHHTSCHHHHHHHTTCEEECCCCBHHHHH
T ss_pred CCCCCCCCHHHHHHH---HHH-HHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCHHHHCCCCCCCCCCCCCHHHHH
T ss_conf 665433105887766---888-8889999987652157717999926764222202522330257740027999999999
Q ss_pred HHCC
Q ss_conf 2338
Q gi|254780799|r 664 TILG 667 (806)
Q Consensus 664 tild 667 (806)
-||.
T Consensus 200 ~Il~ 203 (389)
T 1fnn_A 200 DILL 203 (389)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9999