HHsearch results for GI: 254780799 and protein with PDBid: 1p9r_A
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=94.77 E-value=0.028 Score=35.10 Aligned_cols=59 Identities=29% Similarity=0.576 Sum_probs=37.8
Q ss_pred HCCCCCCCCEEEEECCCCCE--EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEE-CCCHHHHHH
Q ss_conf 10456666667854100202--355304774067999999999998299578478885-231001110
Q gi|254780799|r 437 NLGKSIEGKPIIADLARMPH--LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMI-DPKMLELSV 501 (806)
Q Consensus 437 aLGKdI~G~pvv~DLakMPH--LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklili-DPK~vEls~ 501 (806)
.||-+-.-...+-.+...|| +||+|.||||||--+++|+-.+ .+|+ .+.+.| || +|.-.
T Consensus 148 ~Lg~~~~~~~~l~~~~~~~~GlilisGpTGSGKSTTl~a~l~~i---~~~~-r~IiTiEDP--vE~~~ 209 (418)
T 1p9r_A 148 SLGMTAHNHDNFRRLIKRPHGIILVTGPTGSGKSTTLYAGLQEL---NSSE-RNILTVEDP--IEFDI 209 (418)
T ss_dssp GSCCCHHHHHHHHHHHTSSSEEEEEECSTTSCHHHHHHHHHHHH---CCTT-SCEEEEESS--CCSCC
T ss_pred HCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH---CCCC-CEEEEEECC--CCCCC
T ss_conf 55996789999999985689779996799886417899998775---0698-359997067--32445