HHsearch results for GI: 254780799 and protein with PDBid: 1sxj_D

>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20

Probab=93.69  E-value=0.028  Score=35.03  Aligned_cols=70  Identities=20%  Similarity=0.336  Sum_probs=40.9

Q ss_pred             CCCCCCEEEE--HHHCCCHHHHHCCCCCHHHCCCCCCCCEEEE-------ECCCCCEEEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             2456623873--4230721343022100021045666666785-------410020235530477406799999999999
Q gi|254780799|r  409 PNDIRETVML--RDLIVSRVFEKNQCDLAINLGKSIEGKPIIA-------DLARMPHLLIAGTTGSGKSVAINTMILSLL  479 (806)
Q Consensus       409 PN~~r~~V~l--reil~s~~f~~s~~~L~iaLGKdI~G~pvv~-------DLakMPHLLIAGtTGSGKSV~iN~iI~SlL  479 (806)
                      ||++|++-..  .+.+..+.|.+.-.|-.+   .||.|+.-+.       +-.+.||+|+-|..|+||+.++.++.-.+.
T Consensus         7 ~~~~~~~~~~~~~~~~~~~pw~eKyrP~~~---~divg~~~~~~~L~~~i~~~~~~~lLl~Gp~G~GKTt~a~~la~~~~   83 (353)
T 1sxj_D            7 PNKKRKISKLAAEQSLAQQPWVEKYRPKNL---DEVTAQDHAVTVLKKTLKSANLPHMLFYGPPGTGKTSTILALTKELY   83 (353)
T ss_dssp             -------------------CHHHHTCCSST---TTCCSCCTTHHHHHHHTTCTTCCCEEEECSTTSSHHHHHHHHHHHHH
T ss_pred             CCCCCHHHHHHHHCCCCCCCHHHHHCCCCH---HHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf             875331345555312136941686589989---99139699999999999769987599889599989999999998447


Q ss_pred             HH
Q ss_conf             82
Q gi|254780799|r  480 YR  481 (806)
Q Consensus       480 yk  481 (806)
                      ..
T Consensus        84 ~~   85 (353)
T 1sxj_D           84 GP   85 (353)
T ss_dssp             HH
T ss_pred             CC
T ss_conf             87