HHSEARCH alignment of GI: 254780799 and SCOP domain: d1g6oa_

Alignment
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=97.62  E-value=0.00011  Score=51.25  Aligned_cols=94  Identities=21%  Similarity=0.329  Sum_probs=52.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEE-CCCHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             02355304774067999999999998299578478885-23100111027703431223343045668999999999999
Q gi|254780799|r  455 PHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMI-DPKMLELSVYDGIPNLLTPVVTNPQKAVTVLKWLVCEMEER  533 (806)
Q Consensus       455 PHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklili-DPK~vEls~Y~~iPHLl~pVvTd~~kA~~aL~w~V~EMe~R  533 (806)
                      -.+||+|.|||||+.++|+++     ..-|++.|.+.| ||--+.|...+.++++...--.++.   .+|+.+.+ |  |
T Consensus       167 ~nili~G~tgSGKTT~l~al~-----~~i~~~~rivtiEd~~El~l~~~~~~~~~~~~~~~~~~---~ll~~~lR-~--~  235 (323)
T d1g6oa_         167 KNVIVCGGTGSGKTTYIKSIM-----EFIPKEERIISIEDTEEIVFKHHKNYTQLFFGGNITSA---DCLKSCLR-M--R  235 (323)
T ss_dssp             CCEEEEESTTSSHHHHHHHHG-----GGSCTTCCEEEEESSCCCCCSSCSSEEEEECBTTBCHH---HHHHHHTT-S--C
T ss_pred             CCEEEEEECCCCCHHHHHHHH-----HHCCCCCCEEECCCHHHHHCCCCCCCCEECCCCCHHHH---HHHHHHHC-C--C
T ss_conf             888999403566257899986-----53014562331132265511112454100146542499---99999743-4--9


Q ss_pred             HHHHHHCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf             9999870899689999999988744786
Q gi|254780799|r  534 YQKMSKIGVRNIDGFNLKVAQYHNTGKK  561 (806)
Q Consensus       534 Y~l~a~~~vRni~~yN~k~~~~~~~~~~  561 (806)
                      =+.+----+|.-+.|. -+ ++...|.+
T Consensus       236 pd~iivgEiR~~ea~~-~l-~a~~tGh~  261 (323)
T d1g6oa_         236 PDRIILGELRSSEAYD-FY-NVLCSGHK  261 (323)
T ss_dssp             CSEEEESCCCSTHHHH-HH-HHHHTTCS
T ss_pred             CCCCCCCCCCCHHHHH-HH-HHHHHCCC
T ss_conf             9854578667465999-99-99981698


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: RecA protein-like (ATPase-domain)
domain: Hexameric traffic ATPase, HP0525
species: Helicobacter pylori [TaxId: 210]