HHsearch alignment for GI: 254780800 and conserved domain: COG3820
>COG3820 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=100.00 E-value=0 Score=627.32 Aligned_cols=189 Identities=67% Similarity=1.033 Sum_probs=176.9
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCHHHEEEECCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEE-CC
Q ss_conf 98868861345430242043479999967087120511112414638961147401278489999997616487704-03
Q gi|254780800|r 1 MCQRPLMPKASAVWLIDNTSLSFDQIAEFCGLHLLEVMAIADGESLQGIKGFNLISSGQLSAEEIALGEKDKNYKLK-IS 79 (192)
Q Consensus 1 M~~~pLMPkATAvWLvdNT~LtF~QIa~FC~lH~LEVq~IADGeva~gi~g~dPi~~gqLt~eEI~~ce~d~~~~L~-l~ 79 (192)
T Consensus 1 ~~~~~lmpkatavwlvdNTsLsF~QIA~FCglHplEvk~iADGE~aq~IkGldPI~~GQLtreEi~rae~dP~~~lk~l~ 80 (230)
T COG3820 1 MATQLLMPKATAVWLVDNTSLSFDQIADFCGLHPLEVKGIADGEVAQGIKGLDPIANGQLTREEIARAEKDPNYRLKILS 80 (230)
T ss_pred CCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCC
T ss_conf 97444566643799871663259999988476801133102614541455788413575169999865249324444305
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCHHHCCC
Q ss_conf 66433442243556534203311571799999984245584243466438758999996288877012683773322564
Q gi|254780800|r 80 KPKSYILESTKKKKRYTPVSKRQDRPNAILWLIRNYPRLKDAQISHLVGTTGSTIEQIRNRTHWNTANLVPMDPVTLGLC 159 (192)
Q Consensus 80 ~~~~~~~~~~~Kg~kYTPlSkRqDkPdAI~WLiknhPeL~D~QI~KLiGTTK~TI~sIRdRtHWN~~Ni~P~DPV~LGLC 159 (192)
T Consensus 81 ~p~~~~~~~kkk~prYTPvsrRQDrP~AI~Wl~rnhPelkDaQIskliGTTK~TIeqiR~RtHWNsani~p~DPVtLGlc 160 (230)
T COG3820 81 SPKVELPESKKKGPRYTPVSRRQDRPDAILWLLRNHPELKDAQISKLIGTTKSTIEQIRTRTHWNSANITPMDPVTLGLC 160 (230)
T ss_pred CCCCCCCCCCCCCCCCCCCHHCCCCCCCEEHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEH
T ss_conf 75111661100388767602204785211047424864017899999732188899997631233146761796114200
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 89999999999730121245545554205012
Q gi|254780800|r 160 AQIDLDREIEKCSKNTEAKYNKAVDDISTPFS 191 (192)
Q Consensus 160 sQ~dLd~av~KA~~~~~~~~~~~~~~~s~p~~ 191 (192)
T Consensus 161 sQidLd~~Veras~~r~--~~~e~~~TL~pAs 190 (230)
T COG3820 161 SQIDLDKEVERASRGRP--TAKELGPTLLPAS 190 (230)
T ss_pred HHHHHHHHHHHHCCCCC--CCCCCCCCCCCHH
T ss_conf 01005889987447999--9788887426535