HHsearch alignment for GI: 254780801 and conserved domain: COG0787
>COG0787 Alr Alanine racemase [Cell envelope biogenesis, outer membrane].
Probab=99.27 E-value=8.9e-11 Score=93.81 Aligned_cols=207 Identities=16% Similarity=0.207 Sum_probs=145.6
Q ss_pred HHHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf 9999999999999981989644189987189----9999999-9997298100012100011110000012587302302
Q gi|254780801|r 6 KLQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG 80 (222)
Q Consensus 6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG 80 (222)
T Consensus 10 dl~Al~~N~~~i~~~~~---~-~~~~AVVKAnAYGhG~~~va~~l~~~g~~~f~VA~l~EAi~LR~~gi~--~~~IlvL~ 83 (360)
T COG0787 10 DLGALRHNLRALRELAG---P-AKLMAVVKANAYGHGAVRVAKALLDAGADGFGVASLEEAIELREAGIT--GAPILVLE 83 (360)
T ss_pred EHHHHHHHHHHHHHHCC---C-CEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCC--CCCEEEEC
T ss_conf 68999999999997478---8-579999965436778999999999859998998629999999971888--99789973
Q ss_pred CCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHH
Q ss_conf 44320013201110000122222001344333333114303688970046656346570001222344310431100111
Q gi|254780801|r 81 SLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGL 160 (222)
Q Consensus 81 ~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GL 160 (222)
T Consensus 84 g~~~~~~~~~~~~~~l~~~v~s~~ql~~l~~~~~~~-~~l~vhLkiDTG--M~RlG~~~~~~~~~~~~~~~~~~~~~~gi 160 (360)
T COG0787 84 GFFPAEELELAAAYNLTPVVNSLEQLEALKNAALKN-KPLKVHLKIDTG--MNRLGLRPEEAVALAIDLIALKNLDLEGI 160 (360)
T ss_pred CCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCC-CCEEEEEEECCC--CCCCCCCHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 758835678999869738889999999999755106-962799997789--87579884899999998763248755999
Q ss_pred EECCCCCCCC-----HHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf 0115433452-----058999999988758947224777348999980898899711323899999
Q gi|254780801|r 161 MCIPPAMGNP-----KPHFYLLSEIARECKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222)
Q Consensus 161 Mti~p~~~d~-----~~~F~~l~~l~~~~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222)
T Consensus 161 ~SHfa~ADe~~~~~~~~Q~~~F~~~~~~~~~~~~h~aNSa~~~~~~~~~~d~vRpGi~lYG~~P~~ 226 (360)
T COG0787 161 FSHFACADEPEDPYTLKQLERFNLAKQGLPGELSHLANSAGLLLGPDYHFDMVRPGIALYGLSPSG 226 (360)
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCEEECCEEEECCCCCC
T ss_conf 715677888898278999999999864698753788555877068642251464001322688565