HHsearch alignment for GI: 254780801 and conserved domain: COG1166
>COG1166 SpeA Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism].
Probab=91.00 E-value=1.1 Score=26.05 Aligned_cols=169 Identities=14% Similarity=0.116 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCEEE-EECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC---C-------
Q ss_conf 89999999999999999819896441899-871899999999999729810001210001111000001---2-------
Q gi|254780801|r 3 LGNKLQVFKQKIENSAILAKRPKDSVSLV-AVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRK---E------- 71 (222)
Q Consensus 3 i~~nl~~i~~~I~~a~~~~gR~~~~v~Li-aVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~---~------- 71 (222)
T Consensus 90 L~~Rl~~ln~aF~~Ai~ey~Y~-g~Y~~VyPIKvNQ~r~vVe~Lv~~g---~~~~~GLEAGSK~ELm~vLA~~~~~~~~I 165 (652)
T COG1166 90 LQHRLRSLNAAFARAIEEYGYP-GGYFAVYPIKVNQHRRVVESLVASG---KGYPLGLEAGSKAELMAVLAHAGNPGSLI 165 (652)
T ss_pred HHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEECCHHHHHHHHHHCC---CCCCCCCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf 9999999999999999980889-8605898766554188999998636---89877666788799999998338999717
Q ss_pred -----C---CCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE-----------CCCCC
Q ss_conf -----5---8730230244320013201110000122222001344333333114303688970-----------04665
Q gi|254780801|r 72 -----W---DVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVN-----------TGYEI 132 (222)
Q Consensus 72 -----~---~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN-----------~~~e~ 132 (222)
T Consensus 166 vCNGyKDrEyI~lAlig~kLG------h~v~i---vIEklsEl~~Vl~eA~~lgvkP~lGvR~RL~sqGsGkW~~SgG~k 236 (652)
T COG1166 166 VCNGYKDREYIRLALIGEKLG------HKVYI---VIEKLSELDLVLEEAKQLGVKPRLGVRARLASQGSGKWQSSGGEK 236 (652)
T ss_pred EECCCCCHHHHHHHHHHHHHC------CCEEE---EEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCH
T ss_conf 845746099999999999827------95499---992267999999999973999763368886235567500046831
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCHHHHEE--CCCCCCCCHH----------HHHHHHHHHHHC
Q ss_conf 634657000122234431043110011101--1543345205----------899999998875
Q gi|254780801|r 133 QKSGIMPNQTKDFVILCRQKYQLNVEGLMC--IPPAMGNPKP----------HFYLLSEIAREC 184 (222)
Q Consensus 133 ~K~G~~p~el~~l~~~i~~~~~L~i~GLMt--i~p~~~d~~~----------~F~~l~~l~~~~ 184 (222)
T Consensus 237 sKFGLsa~qvL~~v~~Lre~~~Ld~l~llHFHlGSQisnI~~ik~~~rEA~r~YvEL~klGa~i 300 (652)
T COG1166 237 SKFGLSATQVLQVVERLREANLLDSLQLLHFHLGSQISNIRDIKTGVREAARFYVELRKLGANI 300 (652)
T ss_pred HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 0148888999999999876265776678764100013456999999999999999999827886