HHsearch alignment for GI: 254780801 and conserved domain: COG1166

>COG1166 SpeA Arginine decarboxylase (spermidine biosynthesis) [Amino acid transport and metabolism].
Probab=91.00  E-value=1.1  Score=26.05  Aligned_cols=169  Identities=14%  Similarity=0.116  Sum_probs=102.7

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEE-EECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCC---C-------
Q ss_conf             89999999999999999819896441899-871899999999999729810001210001111000001---2-------
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLV-AVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRK---E-------   71 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~Li-aVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~---~-------   71 (222)
T Consensus        90 L~~Rl~~ln~aF~~Ai~ey~Y~-g~Y~~VyPIKvNQ~r~vVe~Lv~~g---~~~~~GLEAGSK~ELm~vLA~~~~~~~~I  165 (652)
T COG1166          90 LQHRLRSLNAAFARAIEEYGYP-GGYFAVYPIKVNQHRRVVESLVASG---KGYPLGLEAGSKAELMAVLAHAGNPGSLI  165 (652)
T ss_pred             HHHHHHHHHHHHHHHHHHHCCC-CCEEEEEEEEECCHHHHHHHHHHCC---CCCCCCCCCCCHHHHHHHHHHCCCCCCEE
T ss_conf             9999999999999999980889-8605898766554188999998636---89877666788799999998338999717


Q ss_pred             -----C---CCCEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE-----------CCCCC
Q ss_conf             -----5---8730230244320013201110000122222001344333333114303688970-----------04665
Q gi|254780801|r   72 -----W---DVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVN-----------TGYEI  132 (222)
Q Consensus        72 -----~---~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN-----------~~~e~  132 (222)
T Consensus       166 vCNGyKDrEyI~lAlig~kLG------h~v~i---vIEklsEl~~Vl~eA~~lgvkP~lGvR~RL~sqGsGkW~~SgG~k  236 (652)
T COG1166         166 VCNGYKDREYIRLALIGEKLG------HKVYI---VIEKLSELDLVLEEAKQLGVKPRLGVRARLASQGSGKWQSSGGEK  236 (652)
T ss_pred             EECCCCCHHHHHHHHHHHHHC------CCEEE---EEECHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCH
T ss_conf             845746099999999999827------95499---992267999999999973999763368886235567500046831


Q ss_pred             CCCCCCCCHHHHHHHHHHCCCCCCHHHHEE--CCCCCCCCHH----------HHHHHHHHHHHC
Q ss_conf             634657000122234431043110011101--1543345205----------899999998875
Q gi|254780801|r  133 QKSGIMPNQTKDFVILCRQKYQLNVEGLMC--IPPAMGNPKP----------HFYLLSEIAREC  184 (222)
Q Consensus       133 ~K~G~~p~el~~l~~~i~~~~~L~i~GLMt--i~p~~~d~~~----------~F~~l~~l~~~~  184 (222)
T Consensus       237 sKFGLsa~qvL~~v~~Lre~~~Ld~l~llHFHlGSQisnI~~ik~~~rEA~r~YvEL~klGa~i  300 (652)
T COG1166         237 SKFGLSATQVLQVVERLREANLLDSLQLLHFHLGSQISNIRDIKTGVREAARFYVELRKLGANI  300 (652)
T ss_pred             HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             0148888999999999876265776678764100013456999999999999999999827886