HHsearch alignment for GI: 254780801 and conserved domain: PRK13340

Probab=99.37  E-value=1.2e-11  Score=99.57  Aligned_cols=202  Identities=16%  Similarity=0.206  Sum_probs=139.2

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEE
Q ss_conf             8999999999999999981989644189987189----9999999-9997298100012100011110000012587302
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLR   77 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wH   77 (222)
T Consensus        49 l~~N~~~ir~~l----------~~~~ki~AVVKAnAYGhG~~~va~~l~~~G~~~faVA~~~EAi~LR~~g---i~~pIl  115 (404)
T PRK13340         49 LDFNIKKFKRRL----------AANSKVCAVMKADAYGHGIEGVMPTIIENNVPCIAIASNEEARRVRELG---FTGPLL  115 (404)
T ss_pred             HHHHHHHHHHHC----------CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEE
T ss_conf             999999999856----------9999899999111020769999999998799999994999999999659---999979


Q ss_pred             EECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC-CCCCCCCCCCCCHHHHHHHH--HHCCCC
Q ss_conf             302443200132011100001222220013443333331143036889700-46656346570001222344--310431
Q gi|254780801|r   78 FIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT-GYEIQKSGIMPNQTKDFVIL--CRQKYQ  154 (222)
Q Consensus        78 fIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~-~~e~~K~G~~p~el~~l~~~--i~~~~~  154 (222)
T Consensus       116 vl~~~~~~~~~~~~~-~~l~~~I~s~~~l~~l~~~a~~~~~~~~vHlkiDTtG--M~RlG~~~~~~~~~~~~~~i~~~~~  192 (404)
T PRK13340        116 RVRSAEPAEIEQALR-YRLEELIGDDEQAKLLANIAKKNGKPIDIHLALNSGG--MGRNGLDPSTFRGAWEAVRIATLPS  192 (404)
T ss_pred             EEECCCHHHHHHHHH-CCCCEEECCHHHHHHHHHHHHHHCCCEEEEEEECCCC--CCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf             991889899999997-6992599979999999999997199547999981688--6667988102899999999960899


Q ss_pred             CCHHHHEEC-CCCCCC-CHH---HHHHHHH-HHHHCC----CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             100111011-543345-205---8999999-988758----94722477734899998089889971132389999
Q gi|254780801|r  155 LNVEGLMCI-PPAMGN-PKP---HFYLLSE-IARECK----LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       155 L~i~GLMti-~p~~~d-~~~---~F~~l~~-l~~~~~----~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
T Consensus       193 l~v~Gi~SHfa~AD~~~~~~q~~~F~~~~~~l~~~~~~~~~~~~~H~aNSagil~~p~~~~D~VRpGi~LYG~~P~  268 (404)
T PRK13340        193 LGIVGIMTHFPNEDAGEVRWKLARFDQATQGLIGEAGLKREKITLHVANSYATLNVPEAHLDMVRPGGVLYGDSPA  268 (404)
T ss_pred             CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCCCHHHCCCCCCCCEEECCCCC
T ss_conf             7778998204889997159999999999986788752678865399837488760933106712677056688988