HHsearch alignment for GI: 254780801 and conserved domain: pfam02784
>pfam02784 Orn_Arg_deC_N Pyridoxal-dependent decarboxylase, pyridoxal binding domain. These pyridoxal-dependent decarboxylases acting on ornithine, lysine, arginine and related substrates This domain has a TIM barrel fold.
Probab=97.51 E-value=0.0016 Score=45.01 Aligned_cols=164 Identities=12% Similarity=0.027 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHH-HCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCC
Q ss_conf 9999999999999819896441899871899999999999-729810001210001111-00000125873023024432
Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVAL-SCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQS 84 (222)
Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~-~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQs 84 (222)
T Consensus 2 ~~~i~~~~~~~~~~~---~p~~~~~YAvKaN~~~~il~~l~~~G~g-~dv~S~~El~~al~~g~~---~~~I~~~g~~k~ 74 (245)
T pfam02784 2 LGRIIERAHALWQAF---LPRIQPFYAVKANSDPAVLRLLAELGLG-FDCASKGELERVLAAGVP---PERIIFANPCKS 74 (245)
T ss_pred HHHHHHHHHHHHHHH---CCCCEEEEEEEECCCHHHHHHHHHCCCC-EEEECHHHHHHHHHCCCC---HHHEEEECCCCC
T ss_conf 689999999999984---8997799885018889999999982992-999899999999986989---578898144354
Q ss_pred C-HHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC-----------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 0-01320111000012222200134433333311430368897004-----------66563465700012223443104
Q gi|254780801|r 85 N-KVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG-----------YEIQKSGIMPNQTKDFVILCRQK 152 (222)
Q Consensus 85 N-Kvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~-----------~e~~K~G~~p~el~~l~~~i~~~ 152 (222)
T Consensus 75 ~~~i~~a~~~gv~~i~vDs~~el~~i~~~~~~----~~i~lRvnp~~~~~~~~~~~~g~~sKFGi~~~~~~~~~~~~~~~ 150 (245)
T pfam02784 75 RSELRYALEHGVVCVTVDNVEELEKLARLAPE----ARLLLRVKPDVDAHAHCYLSTGQDSKFGADLEEAEALLKAAKEL 150 (245)
T ss_pred HHHHHHHHHHCCCCEEECCHHHHHHHHHHCCC----CCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 68999999827761442799999999985753----77899994067766554444688777689999999999999867
Q ss_pred CCCCHHHHEE-CCCCCCCCHH---HHHHHHHHHH
Q ss_conf 3110011101-1543345205---8999999988
Q gi|254780801|r 153 YQLNVEGLMC-IPPAMGNPKP---HFYLLSEIAR 182 (222)
Q Consensus 153 ~~L~i~GLMt-i~p~~~d~~~---~F~~l~~l~~ 182 (222)
T Consensus 151 -~~~~~GlH~H~GSq~~~~~~~~~~~~~~~~~~~ 183 (245)
T pfam02784 151 -GLNVVGVHFHVGSGCTDAEAFVKAARDARNVFD 183 (245)
T ss_pred -CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf -997547556536578998999999999999999