HHsearch alignment of GI: 254780801 and MMDB domain: 1knw_A_34-273
>1knw_A (A:34-273) Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysine, TIM-barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli}
Probab=96.98 E-value=0.0061 Score=40.65 Aligned_cols=166 Identities=13% Similarity=0.084 Sum_probs=107.2
Q ss_pred HHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH-HCCCCC-CCCCEEEECCCCCC-HHHHHCCCCHHCCCCC
Q ss_conf 64418998718999999999997298100012100011110-000012-58730230244320-0132011100001222
Q gi|254780801|r 25 KDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKW-IPLRKE-WDVQLRFIGSLQSN-KVSEIVSLFDVIETVS 101 (222)
Q Consensus 25 ~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~-~~l~~~-~~i~wHfIG~LQsN-Kvk~i~~~~~~Ihsvd 101 (222)
+..+++.-..|.-|...|...+..-...|==.-..|+.--. ..++.. ..-+-.|-|+.-+. -++.++++-..| ++|
T Consensus 11 ~~~~~i~yAvKaN~~~~il~~l~~~g~g~dvaS~~El~~a~~~g~~~~~~~~~Ii~~gp~k~~~~l~~a~~~g~~i-~vD 89 (240)
T 1knw_A 11 KQFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQIPV-NAG 89 (240)
T ss_dssp TTSSEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCTTTCTTSEEEEESCCCHHHHHHHHHHTCCE-EES
T ss_pred HCCCEEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCHH-HHH
T ss_conf 2669899996107899999999983998899899999999986999667733079747754699998666415201-001
Q ss_pred CCCHHHHHHHHHHHHCCCEEEEEEEECC--------CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEE-CCCCCCCCH-
Q ss_conf 2200134433333311430368897004--------665634657000122234431043110011101-154334520-
Q gi|254780801|r 102 REKTASLLSLEMIKQSRFLPVYIQVNTG--------YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMC-IPPAMGNPK- 171 (222)
Q Consensus 102 s~~~a~~L~~~~~~~~~~~~vliQVN~~--------~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMt-i~p~~~d~~- 171 (222)
|....++|...+.+.+..+.|.+.++.. +..+|+|++++++.++++.+.. +++++.|+-+ ++....++.
T Consensus 90 s~~el~~i~~~~~~~~~~~rv~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~~~~~-~~~~~~GiH~h~gs~~~~~~~ 168 (240)
T 1knw_A 90 SVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQR-HHLQLVGIHMHIGSGVDYAHL 168 (240)
T ss_dssp SHHHHHHHHHHSTTCEEEEEEECSCCSSCTTSCCSSSTTCCCSEEGGGHHHHHHHHHH-TTCEEEEEECCCCCTTCHHHH
T ss_pred HHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEEEEEEEECCCCCCHHHH
T ss_conf 4789999975356674421137886644211235677765453240344678888875-691798888842775326789
Q ss_pred --HHHHHHHHHHHH-CCCCEECCC
Q ss_conf --589999999887-589472247
Q gi|254780801|r 172 --PHFYLLSEIARE-CKLTKLSMG 192 (222)
Q Consensus 172 --~~F~~l~~l~~~-~~~~~LSmG 192 (222)
..-..+..+++. ..+..|.+|
T Consensus 169 ~~~~~~~~~~l~~~~~~~~~idiG 192 (240)
T 1knw_A 169 EQVCGAMVRQVIEFGQDLQAISAG 192 (240)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEECC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECC
T ss_conf 999998877654048146665215