HHsearch alignment of GI: 254780801 and MMDB domain: 2nva_A_25-257
>2nva_A (A:25-257) Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=97.84 E-value=9.9e-05 Score=52.70 Aligned_cols=178 Identities=12% Similarity=0.058 Sum_probs=115.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
Q ss_conf 89999999999999999819896441899871899999999999729810001210001111000001258730230244
Q gi|254780801|r 3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSL 82 (222)
Q Consensus 3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~L 82 (222)
|.+|++.+++.+ +.+++.+|.|..+...+..........|.=.-.-|+..-...--. +-+..|=|+.
T Consensus 3 l~~n~~~~~~~~-----------~~~~i~~avKAN~~~~~~~~l~~~g~g~~vas~~E~~~~~~~g~~--~~~ii~~~~~ 69 (233)
T 2nva_A 3 VEDLIDQWTILF-----------PRVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQIGVS--PSRIIFAHTM 69 (233)
T ss_dssp HHHHHHHHHHHC-----------TTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHHTCC--GGGEEECCSC
T ss_pred HHHHHHHHHHHC-----------CCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCC--HHHEEECCCC
T ss_conf 999999999878-----------998689885328989999999984991998299999999985998--8994745676
Q ss_pred CC-CHHHHHCCC-CHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC--CCCCCCCCCCCHHHHHHHHHHCCCCCCHH
Q ss_conf 32-001320111-000012222200134433333311430368897004--66563465700012223443104311001
Q gi|254780801|r 83 QS-NKVSEIVSL-FDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG--YEIQKSGIMPNQTKDFVILCRQKYQLNVE 158 (222)
Q Consensus 83 Qs-NKvk~i~~~-~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~--~e~~K~G~~p~el~~l~~~i~~~~~L~i~ 158 (222)
.+ .-++.++++ +.++ .+||...++.+...+.+.+..+++.+.++++ +...++|..++++..+.+.. ..+++.+.
T Consensus 70 ~~~~~l~~a~~~g~~~~-~ids~~~l~~l~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~ 147 (233)
T 2nva_A 70 KTIDDLIFAKDQGVDIA-TFDSSFELDKIHTYHPNCKMILRIRCDDPNATVQLGNKFGANEDEIRHLLEYA-KQLDIEVI 147 (233)
T ss_dssp CCHHHHHHHHHHTCCEE-EECSHHHHHHHHHHCTTCEEEEEBCCCCTTCSBCCTTTSSBCGGGHHHHHHHH-HHTTCCEE
T ss_pred CCHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEE
T ss_conf 67899999997401330-12246778777541333233113303455455566655687435679999988-75596367
Q ss_pred HHEECC-CCCCCCH---HHHHHHHHHHHH-----CCCCEECCCCCH
Q ss_conf 110115-4334520---589999999887-----589472247773
Q gi|254780801|r 159 GLMCIP-PAMGNPK---PHFYLLSEIARE-----CKLTKLSMGMTR 195 (222)
Q Consensus 159 GLMti~-p~~~d~~---~~F~~l~~l~~~-----~~~~~LSmGMS~ 195 (222)
|+|+.- ....++. .....+..+.++ ..+..+++|=|.
T Consensus 148 Gih~H~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ggg~ 193 (233)
T 2nva_A 148 GISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGL 193 (233)
T ss_dssp EEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECCSCB
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
T ss_conf 8753546555444889999988888886654413455421224765