HHsearch alignment of GI: 254780801 and MMDB domain: 2nva_A_25-257

>2nva_A (A:25-257) Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=97.84  E-value=9.9e-05  Score=52.70  Aligned_cols=178  Identities=12%  Similarity=0.058  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCC
Q ss_conf             89999999999999999819896441899871899999999999729810001210001111000001258730230244
Q gi|254780801|r    3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSL   82 (222)
Q Consensus         3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~L   82 (222)
                      |.+|++.+++.+           +.+++.+|.|..+...+..........|.=.-.-|+..-...--.  +-+..|=|+.
T Consensus         3 l~~n~~~~~~~~-----------~~~~i~~avKAN~~~~~~~~l~~~g~g~~vas~~E~~~~~~~g~~--~~~ii~~~~~   69 (233)
T 2nva_A            3 VEDLIDQWTILF-----------PRVTPHYAVKCNNDEVLLKTMCDKNVNFDCASSSEIKKVIQIGVS--PSRIIFAHTM   69 (233)
T ss_dssp             HHHHHHHHHHHC-----------TTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHHTCC--GGGEEECCSC
T ss_pred             HHHHHHHHHHHC-----------CCCEEEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCC--HHHEEECCCC
T ss_conf             999999999878-----------998689885328989999999984991998299999999985998--8994745676


Q ss_pred             CC-CHHHHHCCC-CHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC--CCCCCCCCCCCHHHHHHHHHHCCCCCCHH
Q ss_conf             32-001320111-000012222200134433333311430368897004--66563465700012223443104311001
Q gi|254780801|r   83 QS-NKVSEIVSL-FDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG--YEIQKSGIMPNQTKDFVILCRQKYQLNVE  158 (222)
Q Consensus        83 Qs-NKvk~i~~~-~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~--~e~~K~G~~p~el~~l~~~i~~~~~L~i~  158 (222)
                      .+ .-++.++++ +.++ .+||...++.+...+.+.+..+++.+.++++  +...++|..++++..+.+.. ..+++.+.
T Consensus        70 ~~~~~l~~a~~~g~~~~-~ids~~~l~~l~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~  147 (233)
T 2nva_A           70 KTIDDLIFAKDQGVDIA-TFDSSFELDKIHTYHPNCKMILRIRCDDPNATVQLGNKFGANEDEIRHLLEYA-KQLDIEVI  147 (233)
T ss_dssp             CCHHHHHHHHHHTCCEE-EECSHHHHHHHHHHCTTCEEEEEBCCCCTTCSBCCTTTSSBCGGGHHHHHHHH-HHTTCCEE
T ss_pred             CCHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHCCCEEE
T ss_conf             67899999997401330-12246778777541333233113303455455566655687435679999988-75596367


Q ss_pred             HHEECC-CCCCCCH---HHHHHHHHHHHH-----CCCCEECCCCCH
Q ss_conf             110115-4334520---589999999887-----589472247773
Q gi|254780801|r  159 GLMCIP-PAMGNPK---PHFYLLSEIARE-----CKLTKLSMGMTR  195 (222)
Q Consensus       159 GLMti~-p~~~d~~---~~F~~l~~l~~~-----~~~~~LSmGMS~  195 (222)
                      |+|+.- ....++.   .....+..+.++     ..+..+++|=|.
T Consensus       148 Gih~H~~s~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ggg~  193 (233)
T 2nva_A          148 GISFHVGSGSRNPEAYYRAIKSSKEAFNEAISVGHKPYILDIGGGL  193 (233)
T ss_dssp             EEECCCCBSBCCHHHHHHHHHHHHHHHHHHHHHTCCCCEEECCSCB
T ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
T ss_conf             8753546555444889999988888886654413455421224765