HHsearch alignment of GI: 254780801 and MMDB domain: 3gwq_A_72-295

>3gwq_A (A:72-295) D-serine deaminase; YP_556991.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=99.37  E-value=1.2e-12  Score=105.87  Aligned_cols=193  Identities=11%  Similarity=0.057  Sum_probs=149.3

Q ss_pred             CEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCC--CCHHCCCCCCCC
Q ss_conf             1899871899999999-9997298100012100011110000012587302302443200132011--100001222220
Q gi|254780801|r   28 VSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVS--LFDVIETVSREK  104 (222)
Q Consensus        28 v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~--~~~~Ihsvds~~  104 (222)
                      |++..+.|+.+...+. .+.++|.+-|.....+|+............+-++..++-+.-....+..  ....+-++||++
T Consensus         1 v~i~~~vKan~~~~i~~~l~~~g~~g~~vas~~E~~~~~~~g~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~ids~~   80 (224)
T 3gwq_A            1 VKLAPHGKTTXAPQLFRRQLETGAWGITLATAHQVRAAYHGGVSRVLXANQLVGRRNXXXVAELLSDPEFEFFCLVDSVE   80 (224)
T ss_dssp             CEECCBCTTTCCHHHHHHHHHTTCCCEEESSHHHHHHHHHTTCCEEEECSCCCSHHHHHHHHHHTTCTTCEEEEEECCHH
T ss_pred             CEEEEEECCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECHH
T ss_conf             74999833236899999999779986998669999999973999879974778978999999863267804799980678


Q ss_pred             HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCH---HHHHHHHHH-
Q ss_conf             0134433333311430368897004665634657000122234431043110011101154334520---589999999-
Q gi|254780801|r  105 TASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPK---PHFYLLSEI-  180 (222)
Q Consensus       105 ~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~---~~F~~l~~l-  180 (222)
                      .+++|.+.+.+.+...++.+.+|++...++.++.++++..++..+...+++.+.|+++......++.   ..+..+.++ 
T Consensus        81 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~Gi~~H~g~~~~~~~~~~~~~~~~~~~  160 (224)
T 3gwq_A           81 GVEQLGEFFKSVNKQLQVLLELGVPGGRTGVRDAAQRNAVLEAITRYPDTLKLAGVELYEGVLKEEHEVREFLQSAVAVT  160 (224)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEECCTTSSSSBCSHHHHHHHHHHHHTSTTTEEEEEEEECGGGCCSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf             99999999875464011111134333333333432399999999746677457799953143578266999999999999


Q ss_pred             ---HHHC----CCCEECCCCCHHHHHHHHHC---------CCEEEECHHHCCCCCC
Q ss_conf             ---8875----89472247773489999808---------9889971132389999
Q gi|254780801|r  181 ---AREC----KLTKLSMGMTRDFELAIASG---------ATSVRIGSGIFGERPC  220 (222)
Q Consensus       181 ---~~~~----~~~~LSmGMS~D~~~Ai~~G---------st~vRiGs~iFG~R~~  220 (222)
                         .+++    ..-.++-|++.||..++..-         .+++|.|+.+||..+|
T Consensus       161 ~~~~~~~~~~~~~i~iggG~~~~~~~~~~~~~~~~~~~~~~~~~epGr~l~~~~~~  216 (224)
T 3gwq_A          161 RELVEQERFARAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGCYLTHDVGI  216 (224)
T ss_dssp             HHHHHHTCCSSSSEEEEECCSTTHHHHHHHTHHHHHSSSEEEEECCCCSSSSCSHH
T ss_pred             HHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCEEEECCCEEEEECCHH
T ss_conf             99999752377763366114733122002443156786411696371589705413