HHsearch alignment of GI: 254780801 and MMDB domain: 3gwq_A_72-295
>3gwq_A (A:72-295) D-serine deaminase; YP_556991.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.00A {Burkholderia xenovorans LB400}
Probab=99.37 E-value=1.2e-12 Score=105.87 Aligned_cols=193 Identities=11% Similarity=0.057 Sum_probs=149.3
Q ss_pred CEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCC--CCHHCCCCCCCC
Q ss_conf 1899871899999999-9997298100012100011110000012587302302443200132011--100001222220
Q gi|254780801|r 28 VSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVS--LFDVIETVSREK 104 (222)
Q Consensus 28 v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~--~~~~Ihsvds~~ 104 (222)
|++..+.|+.+...+. .+.++|.+-|.....+|+............+-++..++-+.-....+.. ....+-++||++
T Consensus 1 v~i~~~vKan~~~~i~~~l~~~g~~g~~vas~~E~~~~~~~g~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~ids~~ 80 (224)
T 3gwq_A 1 VKLAPHGKTTXAPQLFRRQLETGAWGITLATAHQVRAAYHGGVSRVLXANQLVGRRNXXXVAELLSDPEFEFFCLVDSVE 80 (224)
T ss_dssp CEECCBCTTTCCHHHHHHHHHTTCCCEEESSHHHHHHHHHTTCCEEEECSCCCSHHHHHHHHHHTTCTTCEEEEEECCHH
T ss_pred CEEEEEECCCCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEECHH
T ss_conf 74999833236899999999779986998669999999973999879974778978999999863267804799980678
Q ss_pred HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCH---HHHHHHHHH-
Q ss_conf 0134433333311430368897004665634657000122234431043110011101154334520---589999999-
Q gi|254780801|r 105 TASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPK---PHFYLLSEI- 180 (222)
Q Consensus 105 ~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~---~~F~~l~~l- 180 (222)
.+++|.+.+.+.+...++.+.+|++...++.++.++++..++..+...+++.+.|+++......++. ..+..+.++
T Consensus 81 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~Gi~~H~g~~~~~~~~~~~~~~~~~~~ 160 (224)
T 3gwq_A 81 GVEQLGEFFKSVNKQLQVLLELGVPGGRTGVRDAAQRNAVLEAITRYPDTLKLAGVELYEGVLKEEHEVREFLQSAVAVT 160 (224)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEECCTTSSSSBCSHHHHHHHHHHHHTSTTTEEEEEEEECGGGCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHH
T ss_conf 99999999875464011111134333333333432399999999746677457799953143578266999999999999
Q ss_pred ---HHHC----CCCEECCCCCHHHHHHHHHC---------CCEEEECHHHCCCCCC
Q ss_conf ---8875----89472247773489999808---------9889971132389999
Q gi|254780801|r 181 ---AREC----KLTKLSMGMTRDFELAIASG---------ATSVRIGSGIFGERPC 220 (222)
Q Consensus 181 ---~~~~----~~~~LSmGMS~D~~~Ai~~G---------st~vRiGs~iFG~R~~ 220 (222)
.+++ ..-.++-|++.||..++..- .+++|.|+.+||..+|
T Consensus 161 ~~~~~~~~~~~~~i~iggG~~~~~~~~~~~~~~~~~~~~~~~~~epGr~l~~~~~~ 216 (224)
T 3gwq_A 161 RELVEQERFARAPAVLSGAGSAWYDVVAEEFVKASETGKVEVVLRPGCYLTHDVGI 216 (224)
T ss_dssp HHHHHHTCCSSSSEEEEECCSTTHHHHHHHTHHHHHSSSEEEEECCCCSSSSCSHH
T ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCEEEECCCEEEEECCHH
T ss_conf 99999752377763366114733122002443156786411696371589705413