HHsearch results for GI: 254780801 and protein with PDBid: 1bd0_A
>1bd0_A Alanine racemase; isomerase, pyridoxal phosphate, alanine phosphonate; HET: IN5; 1.60A {Geobacillus stearothermophilus} SCOP: b.49.2.2 c.1.6.1 PDB: 1sft_A* 2sfp_A* 1l6g_A* 1niu_A* 1l6f_A* 1xql_A* 1xqk_A* 1epv_A* 1ftx_A*
Probab=99.42 E-value=3e-12 Score=102.29 Aligned_cols=205 Identities=17% Similarity=0.143 Sum_probs=138.2
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 999999999999981989644189987189----99999999-9972981000121000111100000125873023024
Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS 81 (222)
Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~ 81 (222)
+..++.+++...+.. ++.++++||.|. +....|.. +.++|++.||--+++|+.+=...- .+...-..|+
T Consensus 14 l~al~~N~~~i~~~~---~~~~~i~aVVKanAYGhG~~~ia~~l~~~Gv~~faVa~~~EA~~LR~~g---i~~~ILvl~~ 87 (388)
T 1bd0_A 14 LDAIYDNVENLRRLL---PDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKG---IEAPILVLGA 87 (388)
T ss_dssp HHHHHHHHHHHHHHS---CTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTT---CCSCEEECSC
T ss_pred HHHHHHHHHHHHHHC---CCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEEEECC
T ss_conf 999999999999748---9989799999150264888999999998698999986799999999708---9985899617
Q ss_pred CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHCCCCCCHHHH
Q ss_conf 432001320111000012222200134433333311430368897004665634657000-1222344310431100111
Q gi|254780801|r 82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQ-TKDFVILCRQKYQLNVEGL 160 (222)
Q Consensus 82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~e-l~~l~~~i~~~~~L~i~GL 160 (222)
....-...++. .+...+|.+...++.+... .+.+.+++|+|+||++ .+|.||.|+| +..++..+..+++|++.|+
T Consensus 88 ~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~-~~~~~~~~vhLkiDTG--M~RlG~~~~e~~~~~~~~i~~~~~l~~~Gi 163 (388)
T 1bd0_A 88 SRPADAALAAQ-QRIALTVFRSDWLEEASAL-YSGPFPIHFHLKMDTG--MGRLGVKDEEETKRIVALIERHPHFVLEGL 163 (388)
T ss_dssp CCGGGHHHHHH-TTEEEEECCHHHHHHHHHH-CCCSSCEEEEEEBCSS--SCSSSBCSHHHHHHHHHHHHHSTTEEEEEE
T ss_pred CCHHHHHHHHH-CCCCCCCCCHHHHHHHHHH-HHCCCCEEEEEEEECC--CCCCCCCCHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 88689999873-2666420629999988887-6158863899998168--886787827899999999985899616789
Q ss_pred EECCCCCCCC-----HHHHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC
Q ss_conf 0115433452-----058999999988758--947224777348999980898899711323899999
Q gi|254780801|r 161 MCIPPAMGNP-----KPHFYLLSEIARECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222)
Q Consensus 161 Mti~p~~~d~-----~~~F~~l~~l~~~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222)
||-=+..+++ ...|..+..+.+... ....|++=|.-.-.--+..-++||+|.++||-.|..
T Consensus 164 ~tH~a~ad~~~~~~~~~q~~~~~~~~~~~~~~~~~~h~anS~~~l~~~~~~~d~vR~Gi~lyG~~p~~ 231 (388)
T 1bd0_A 164 YTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSP 231 (388)
T ss_dssp ECCCSSTTSSCCHHHHHHHHHHHHHHTTCSSCCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCCSCG
T ss_pred EECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCEECCEEEEECCCCC
T ss_conf 70246732235288999999999999975324540666256777539502376041336888437776