HHsearch results for GI: 254780801 and protein with PDBid: 1vfs_A

>1vfs_A Alanine racemase; TIM-barrel, greek-KEY motief, isomerase; HET: KCX DCS; 1.90A {Streptomyces lavendulae} SCOP: b.49.2.2 c.1.6.1 PDB: 1vfh_A* 1vft_A*
Probab=99.45  E-value=1.1e-12  Score=105.29  Aligned_cols=205  Identities=15%  Similarity=0.126  Sum_probs=140.1

Q ss_pred             HHHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHH-HHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC
Q ss_conf             9999999999999981989644189987189----9999999-9997298100012100011110000012587302302
Q gi|254780801|r    6 KLQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIR-VALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG   80 (222)
Q Consensus         6 nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~-~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG   80 (222)
                      |++.++.+++...+.+   + ..+++||.|.    +....|. .+.++|++.||-.+++|+.+=.....   +...-..|
T Consensus        13 dl~ai~~N~~~ir~~~---~-~~~i~aVVKAnAYGhG~~~va~~l~~~Gi~~faVa~i~EA~~LR~~g~---~~~ilil~   85 (386)
T 1vfs_A           13 DLDAVRANVRALRARA---P-RSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGI---QGRIMCWL   85 (386)
T ss_dssp             EHHHHHHHHHHHHTTS---T-TSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTC---CSEEEECC
T ss_pred             EHHHHHHHHHHHHHHC---C-CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCC---CCCEEEEE
T ss_conf             6999999999999768---9-983999992504638799999999986989999813999999997189---99858994


Q ss_pred             CCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHH---HCCCCCCH
Q ss_conf             443200132011100001222220013443333331143036889700466563465700012223443---10431100
Q gi|254780801|r   81 SLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILC---RQKYQLNV  157 (222)
Q Consensus        81 ~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i---~~~~~L~i  157 (222)
                      .....-++.++. .+.+-++.+...++.++..+.+.+++.+|.|+|+|+  .+|.||.|+|+.++++.+   ...++|++
T Consensus        86 ~~~~~~~~~~~~-~~~~~~i~s~~~l~~~~~~a~~~~~~~~vhlkiDTG--M~RlG~~~~e~~~~~~~~~~~~~~~~l~~  162 (386)
T 1vfs_A           86 WTPGGPWREAIE-TDIDVSVSGMWALDEVRAAARAAGRTARIQLKADTG--LGRNGCQPADWAELVGAAVAAQAEGTVQV  162 (386)
T ss_dssp             CCTTCCHHHHHH-TTCEEEECSHHHHHHHHHHHHHHTSCEEEEEEBCSS--CCSSSBCHHHHHHHHHHHHHHHHTTSEEE
T ss_pred             CCCCHHHHHHHH-HCCCEEECCHHHHHHHHHHHHHCCCCCEEEEEECCC--CCCCCCCHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             487058999986-073135475999999999998649982499995167--78678583788999999998621796427


Q ss_pred             HHHEEC-CCCCC-C-C--HHHHHHHHHH---HHH--CCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCC
Q ss_conf             111011-54334-5-2--0589999999---887--5894722477734899998089889971132389999
Q gi|254780801|r  158 EGLMCI-PPAMG-N-P--KPHFYLLSEI---ARE--CKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPC  220 (222)
Q Consensus       158 ~GLMti-~p~~~-d-~--~~~F~~l~~l---~~~--~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~  220 (222)
                      .|+||= +..++ + +  +.++..+.++   ..+  +.....+++-|.---.--+.--+|||+|.++||-.|.
T Consensus       163 ~Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~anS~~~l~~~~~~~d~vR~Gi~lYG~~p~  235 (386)
T 1vfs_A          163 TGVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPS  235 (386)
T ss_dssp             EEEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHCGGGCSSEEEECGGGGTCCSC
T ss_pred             EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHCCCCCCCCCCCCCCEEEECCCCC
T ss_conf             9998644555775306789999999999999997178861565158632017840148742553154667767